DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha55 and spe-5

DIOPT Version :9

Sequence 1:NP_001163597.1 Gene:Vha55 / 41550 FlyBaseID:FBgn0005671 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_491518.1 Gene:spe-5 / 172137 WormBaseID:WBGene00004959 Length:501 Species:Caenorhabditis elegans


Alignment Length:477 Identity:385/477 - (80%)
Similarity:435/477 - (91%) Gaps:3/477 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 HVLAVSRDFISQPRLTYKTVSGVNGPLVILDEVKFPKFAEIVQLRLADGTVRSGQVLEVSGSKAV 74
            |..|:.:::.::|:|||:||.||||||||:..||||.|.|||::.|.:|.:|.|||||.|.:|||
 Worm    25 HRTALIQNYSTKPKLTYQTVFGVNGPLVIVHNVKFPMFNEIVKITLPNGQIRMGQVLESSKNKAV 89

  Fly    75 VQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQPINP 139
            |||||||:|:|||.|.|||||||.|:|||.|||||:|||||||||||||:|.||:|||.||||||
 Worm    90 VQVFEGTTGVDAKFTTCEFTGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDYLDINGQPINP 154

  Fly   140 WSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKLPGKSVLDDHT 204
            ::||||||||||||||||||||||||||||||||||||||||||||.||.|||:|||:   ::.|
 Worm   155 FNRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQIVRQGGLVQLPGR---NNET 216

  Fly   205 DNFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQC 269
            .|||||||||||||||||||||||||.|||:|||||||||||||||||||||:|||||||.||.|
 Worm   217 VNFAIVFAAMGVNMETARFFKQDFEECGSMDNVCLFLNLANDPTIERIITPRIALTAAEFFAYHC 281

  Fly   270 EKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPIL 334
            .|||||:|||||||||||||:|||||||||||||||||||||||||||||||:||.|||||||||
 Worm   282 GKHVLVVLTDMSSYAEALREISAAREEVPGRRGFPGYMYTDLATIYERAGRVKGREGSITQIPIL 346

  Fly   335 TMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSAIGEGMTRKDHSDVS 399
            ||||:|||||||||||||||||||:|:|||.|.||||::||||||||||||:||||||:||||:|
 Worm   347 TMPNNDITHPIPDLTGYITEGQIYIDKQLHKRLIYPPIDVLPSLSRLMKSAVGEGMTREDHSDLS 411

  Fly   400 NQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFISQGNYENRTVFESLDIGWQLL 464
            ||||||||:||||||||||||.|||:||||||||||.|||||||:||.|||||:.|||:|||:||
 Worm   412 NQLYACYAMGKDVQAMKAVVGVEALSPDDLLYLEFLAKFEKNFIAQGRYENRTIVESLNIGWELL 476

  Fly   465 RIFPKEMLKRIPASILAEFYPR 486
            ||||:|||||||.::|.::|.|
 Worm   477 RIFPREMLKRIPETLLEKYYKR 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha55NP_001163597.1 V-ATPase_V1_B 25..488 CDD:273410 381/462 (82%)
spe-5NP_491518.1 V-ATPase_V1_B 40..501 CDD:273410 381/462 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161680
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1156
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H1279
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62168
OrthoDB 1 1.010 - - D276622at33208
OrthoFinder 1 1.000 - - FOG0001501
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100544
Panther 1 1.100 - - O PTHR43389
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1067
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.720

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