DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha55 and atp6v1b1

DIOPT Version :9

Sequence 1:NP_001163597.1 Gene:Vha55 / 41550 FlyBaseID:FBgn0005671 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001107734.1 Gene:atp6v1b1 / 100135740 XenbaseID:XB-GENE-485914 Length:495 Species:Xenopus tropicalis


Alignment Length:484 Identity:422/484 - (87%)
Similarity:453/484 - (93%) Gaps:1/484 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AQREHVLAVSRDFISQPRLTYKTVSGVNGPLVILDEVKFPKFAEIVQLRLADGTVRSGQVLEVSG 70
            |.|||::||:|::||||||:|:||.|||||||:||.|||.::||||...|.|||.||||:|||||
 Frog     3 AAREHMMAVTRNYISQPRLSYRTVCGVNGPLVVLDNVKFAQYAEIVNFTLPDGTSRSGQILEVSG 67

  Fly    71 SKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQ 135
            |||:|||||||||||||.|.||||||||||||||||||||||||||||||||.::|||:|||.||
 Frog    68 SKAIVQVFEGTSGIDAKKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPTVMAEDYLDINGQ 132

  Fly   136 PINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKLPGKSVL 200
            ||||:.|.|||||||||||.|||||||||||||||||||||||||||||||||||||| ..|.|:
 Frog   133 PINPYVRTYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVK-KSKDVM 196

  Fly   201 DDHTDNFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFL 265
            |...|||||||||||||||||||||.|||:||:|:|||||||||||||||||||||||||.||:|
 Frog   197 DYSDDNFAIVFAAMGVNMETARFFKSDFEQNGTMDNVCLFLNLANDPTIERIITPRLALTEAEYL 261

  Fly   266 AYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQ 330
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||
 Frog   262 AYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRSGSITQ 326

  Fly   331 IPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSAIGEGMTRKDH 395
            ||||||||||||||||||||:||||||||||||||||||||:|||||||||||||||||||||||
 Frog   327 IPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDH 391

  Fly   396 SDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFISQGNYENRTVFESLDIG 460
            .||||||||||||||||||||||||||||:.|||||||||.||||.||:||.||||::|||||||
 Frog   392 GDVSNQLYACYAIGKDVQAMKAVVGEEALSSDDLLYLEFLQKFEKQFIAQGPYENRSIFESLDIG 456

  Fly   461 WQLLRIFPKEMLKRIPASILAEFYPRDSR 489
            ||||||||||:|||||.|:|||||||:||
 Frog   457 WQLLRIFPKELLKRIPESMLAEFYPRESR 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha55NP_001163597.1 V-ATPase_V1_B 25..488 CDD:273410 407/462 (88%)
atp6v1b1NP_001107734.1 V-ATPase_V1_B 22..484 CDD:273410 407/462 (88%)
ATP-synt_ab_N 26..92 CDD:280947 50/65 (77%)
V_A-ATPase_B 94..377 CDD:238555 257/283 (91%)
ATP-synt_ab_C 392..479 CDD:278722 74/86 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 426 1.000 Domainoid score I605
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 868 1.000 Inparanoid score I414
OMA 1 1.010 - - QHG62168
OrthoDB 1 1.010 - - D276622at33208
OrthoFinder 1 1.000 - - FOG0001501
OrthoInspector 1 1.000 - - otm49318
Panther 1 1.100 - - LDO PTHR43389
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1067
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.080

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