DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and htr1ab

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001139238.1 Gene:htr1ab / 797538 ZFINID:ZDB-GENE-090409-2 Length:403 Species:Danio rerio


Alignment Length:401 Identity:122/401 - (30%)
Similarity:194/401 - (48%) Gaps:66/401 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 QHNPDED-WLDNIVWVFK---------AFVMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVVS 194
            |::.|.| ..||:....|         :.::..:|:.:|.||..|:.::...|.|:.:.||.:.|
Zfish    12 QNDSDLDHQTDNVTLPVKVPLSYQISTSLLIGALILCSIFGNACVVAAIALERSLQNVANYLIGS 76

  Fly   195 LAMADIMVAIMAMTFNFSVQVTGRWNFSPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPL 259
            ||:.|:||:::.:......||..:|......||::.|||:...|:||||||.|::|||:||..|:
Zfish    77 LAVTDLMVSVLVLPMAALYQVLDKWTLGQVTCDIFISLDILCCTSSILHLCAIALDRYWAITDPI 141

  Fly   260 KYPISMTKRVVGIMLLNTWISPALLSFLPIFIGWYTTPQHQQFVIQNPTQCSFVVNKYYAVISSS 324
            .|....|.:...:::..||.....:|..|:.|           :...|..|....:.:|.:.|:.
Zfish   142 DYMKKRTLKRAALLITVTWFVGFSISIPPMLI-----------MKSQPKTCMISHDPWYTIYSTF 195

  Fly   325 ISFWIPCTIMIFTYLAIFREA--------NRQEKQ---------LMMRHGNAMLMH--RPSMQP- 369
            .:|:||..:|:..|..||:.|        .:.||:         .:.:..|..|..  :.:::| 
Zfish   196 CAFYIPLILMLVLYGRIFKAARFRIRKTVRKPEKKRVKCLTVSPALFKRANGELSKNWKSAVEPK 260

  Fly   370 -------------SGEALS----GSGSSKTLTLHEV-------EQEHTP-TKDKHLIKMKREHKA 409
                         .||:|.    .|.|...|.|...       |.:|.. |:.|..:.:.||.|.
Zfish   261 PAACVNGAIKHAEDGESLEIIEVHSNSKNNLPLPNTPNSVPLFENKHEKNTEAKRKLALARERKT 325

  Fly   410 ARTLGIIMGTFILCWLPFFLWYTLSMTCEECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFRE 474
            .:|||||||||||||||||:...:...|..|.:|..:..::.|:||.||.|||:||||||:||:.
Zfish   326 VKTLGIIMGTFILCWLPFFIKALVMPFCPTCVMPLWLQDVINWLGYSNSLLNPIIYAYFNKDFQS 390

  Fly   475 AFRNTLLCLFC 485
            ||:..:.|.||
Zfish   391 AFKKIIKCHFC 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 53/177 (30%)
7tm_1 170..465 CDD:278431 101/339 (30%)
htr1abNP_001139238.1 7tm_4 46..>208 CDD:304433 52/172 (30%)
7tm_1 52..381 CDD:278431 101/339 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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