DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and gpbar1

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_009303247.3 Gene:gpbar1 / 797190 ZFINID:ZDB-GENE-120315-1 Length:355 Species:Danio rerio


Alignment Length:411 Identity:101/411 - (24%)
Similarity:158/411 - (38%) Gaps:90/411 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 SGLNFNESGAGLS--DHHHHQQHNPDEDWLDNIVWVFKAFVMLLIIIAAICGNLLVIISVMRVRK 183
            |||.....|.||:  |         .||.|.....:|...|.|..||  |..||.:||.:...|:
Zfish     3 SGLTLTADGDGLTIMD---------PEDKLSREKLIFYLTVPLSSII--IFTNLFIIIGIACNRQ 56

  Fly   184 LRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNFSPFL--------CDLWNSLDVY----F 236
            |....|||.:||.:||:...|..                ||:        .|..:.|.:|    |
Zfish    57 LHNTPNYFFLSLLVADLCTGITL----------------PFIPRMSLDRQLDFRHCLVMYIFPNF 105

  Fly   237 STASIL-HLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWISPALLSFLPIFIGW--YTTPQ 298
            ...|.| :|..:..:||..||.||.:......|...:.||..|:.|.|.:.||.| ||  :....
Zfish   106 LFLSFLFNLVMVHYERYLCIVSPLHHSQFWVHRCFPLALLTVWLPPLLYASLPAF-GWNNWIEAA 169

  Fly   299 HQQFVIQNPT----QCSFVVNK------YYAVISSSISFWIPCTIMIFTYLAIFREANRQEKQLM 353
            ..:.:..|.|    |.|...:|      |..|...:..:...|.:::...|.|           :
Zfish   170 SNKSLDSNETFWRSQTSHNASKEDEVCSYKQVFPKAFIYVEVCGLVLPAMLCI-----------V 223

  Fly   354 MRHGNAMLMHRPSMQPSGEALSGSGSSKTLTLHE-VEQEHTPTKDKHLIKMKREHKAARTLGIIM 417
            ...|..:.:.|..:|            ....||. |::..|..:::.|     ..:.|:.:..:.
Zfish   224 CMTGRVLWIARKQLQ------------DICKLHRAVDRLQTSDQEQQL-----NLRYAKCVAAVS 271

  Fly   418 GTFILCWLPFFLWYTLSMTCEECQVPDIVVSILFWI----GYFNSTLNPLIYAYFNRDFREAFRN 478
            .||::||:|:.::..:|:|..:..| .:..|.|:.|    |..:..:.|||....|:.:.|..|.
Zfish   272 LTFLVCWVPYIIYQLMSVTALQSGV-SLPSSSLYIIMSCTGIGSMAVIPLILGLANKQYTEPIRR 335

  Fly   479 TLLCLFCNWWKDRHLPLDIDI 499
            .:|.| .|.|:..|...||.|
Zfish   336 VMLKL-RNRWRGGHSDRDITI 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 52/202 (26%)
7tm_1 170..465 CDD:278431 73/324 (23%)
gpbar1XP_009303247.3 7tmA_GPBAR1 29..326 CDD:320571 80/344 (23%)
TM helix 1 29..54 CDD:320571 10/26 (38%)
TM helix 2 61..86 CDD:320571 10/40 (25%)
TM helix 3 96..126 CDD:320571 8/29 (28%)
TM helix 4 139..162 CDD:320571 8/23 (35%)
TM helix 5 202..231 CDD:320571 4/39 (10%)
TM helix 6 258..288 CDD:320571 7/34 (21%)
TM helix 7 301..326 CDD:320571 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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