DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and Htr5b

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_077371.1 Gene:Htr5b / 79247 RGDID:62388 Length:370 Species:Rattus norvegicus


Alignment Length:417 Identity:116/417 - (27%)
Similarity:188/417 - (45%) Gaps:89/417 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 NSSTGGIALPLGTATPATHELNATQPFGGSGLNFNESGAGLSDHHHHQQHNPDEDWLDNIVWVFK 156
            :.:|.|||.|.|.      |..:..|..|..:.....|..||.      ..|.          |.
  Rat     7 SGATPGIAFPPGP------ESCSDSPSSGRSMGSTPGGLILSG------REPP----------FS 49

  Fly   157 AFVML------LIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQV 215
            ||.:|      |:|.|....||||:::::|||....:.:..|.|.|::|::||.:.|..:...::
  Rat    50 AFTVLVVTLLVLLIAATFLWNLLVLVTILRVRAFHRVPHNLVASTAVSDVLVAALVMPLSLVSEL 114

  Fly   216 TG--RWNFSPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTW 278
            :.  ||.....||.:|.|.||...||||.::..|::|||:.|.:.|:|.:...:|...:|:..||
  Rat   115 SAGRRWQLGRSLCHVWISFDVLCCTASIWNVAAIALDRYWTITRHLQYTLRTRRRASALMIAITW 179

  Fly   279 ISPALLSFLPIFIGW---YTTPQHQQFVIQNPTQCSFVVNKYYAVISSSISFWIPCTIMIFTYLA 340
            ...||::..|:..||   |.....:..|.|.|:         |||.|:..:|::|..:::|.|..
  Rat   180 ALSALIALAPLLFGWGEAYDARLQRCQVSQEPS---------YAVFSTCGAFYVPLAVVLFVYWK 235

  Fly   341 IFREA----NRQEKQLMMRHGNAMLMHRP---------------SMQPSGEALSGSGSSKTLTLH 386
            |::.|    .|:.:.::...........|               :.|.||::.            
  Rat   236 IYKAAKFRFGRRRRAVVPLPATTQAKEAPQESETVFTARCRATVAFQTSGDSW------------ 288

  Fly   387 EVEQEHTPTKDKHLIKMKREHKAARTLGIIMGTFILCWLPFFLWYTLSMTCEECQVPDIVVSILF 451
                           :.::|.:||..:||::|.|:|||:||||...:|..| .|.:|.|..||..
  Rat   289 ---------------REQKEKRAAMMVGILIGVFVLCWIPFFLTELVSPLC-ACSLPPIWKSIFL 337

  Fly   452 WIGYFNSTLNPLIYAYFNRDFREAFRN 478
            |:||.||..|||||..||:::..||::
  Rat   338 WLGYSNSFFNPLIYTAFNKNYNNAFKS 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 56/182 (31%)
7tm_1 170..465 CDD:278431 90/318 (28%)
Htr5bNP_077371.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 9/34 (26%)
7tm_1 69..351 CDD:278431 90/318 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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