DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Octbeta2R and Gpr21

DIOPT Version :10

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001383750.1 Gene:Gpr21 / 689917 RGDID:1586383 Length:349 Species:Rattus norvegicus


Alignment Length:341 Identity:81/341 - (23%)
Similarity:144/341 - (42%) Gaps:52/341 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 VFKAFVMLLIIIAAICGNLLVIISVMRVRKL--RVITNYFVVSLAMADIMVAIMAMTFNFSVQVT 216
            :.:..:::.:.:..|.||::||. |.....|  ...|:||:.::|.||::|.:..:..:.|:...
  Rat    29 LLEVLIVVFLTVLIISGNIIVIF-VFHCAPLLNHHSTSYFIQTMAYADLLVGVSCLVPSLSLLYY 92

  Fly   217 GRWNFSPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWISP 281
            .........|.::..:.....:.|:..|.|||:|||.||.|||.|...:|...:.:.:...|:..
  Rat    93 PLPMEEAMTCQVFGFIVSVLKSISMASLACISIDRYIAITKPLTYNTLVTPWRLRLCIFLIWLYS 157

  Fly   282 ALLSFLPIFIGWYTTPQHQQFVIQNPTQC--SFVVNKYYAVISSSISFWIPCTIMI-FTYLAIFR 343
            .|: |||.|..|.....|....    ..|  |:..|.|:.:. ..::.:.|..::: |||..|||
  Rat   158 TLV-FLPSFFHWGKPGYHGDVF----RWCAESWHTNSYFTLF-IVMTLYAPAALIVCFTYFNIFR 216

  Fly   344 EANRQEKQLMMRHGNAMLMHRPSMQPSGEALSGSGSSKTLTLHEVEQEHTPTKDKHLIKMKREHK 408
            ...:..|::..|..      |.|.| :||    :|.::|          .|.|           :
  Rat   217 ICQQHTKEISERQA------RFSSQ-NGE----TGEAQT----------CPDK-----------R 249

  Fly   409 AARTLGIIMGTFILCWLPFFLWYTL--SMTCEECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRD 471
            .|..|..|...|.:.|||:.:::.|  |..|..    .:...:..|:...||..|.:||:..|..
  Rat   250 YAMVLFRITSVFYVLWLPYIIYFLLESSTGCSS----RLASFLTTWLAISNSFCNCIIYSLSNSV 310

  Fly   472 FREAFR--NTLLCLFC 485
            |::..:  :..:|..|
  Rat   311 FQQGLKGLSESVCTSC 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tmA_DmOct-betaAR-like 155..476 CDD:320194 79/327 (24%)
TM helix 1 155..181 CDD:320194 6/25 (24%)
TM helix 2 188..214 CDD:320194 8/25 (32%)
TM helix 3 226..256 CDD:320194 10/29 (34%)
TM helix 4 268..291 CDD:320194 5/22 (23%)
TM helix 5 315..344 CDD:320194 8/29 (28%)
TM helix 6 404..434 CDD:320194 8/31 (26%)
TM helix 7 444..469 CDD:320194 6/24 (25%)
Gpr21NP_001383750.1 7tm_classA_rhodopsin-like 31..308 CDD:410626 77/319 (24%)
TM helix 1 31..56 CDD:410626 6/25 (24%)
TM helix 2 64..90 CDD:410626 8/25 (32%)
TM helix 3 102..132 CDD:410626 10/29 (34%)
TM helix 4 145..164 CDD:410626 4/19 (21%)
TM helix 5 188..213 CDD:410626 6/25 (24%)
TM helix 6 245..275 CDD:410626 9/40 (23%)
TM helix 7 283..308 CDD:410626 6/24 (25%)

Return to query results.
Submit another query.