DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and PTGDR

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_000944.1 Gene:PTGDR / 5729 HGNCID:9591 Length:359 Species:Homo sapiens


Alignment Length:375 Identity:79/375 - (21%)
Similarity:140/375 - (37%) Gaps:104/375 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 LIIIAAICGNLLVIISVMRV-------RKLRVITNYF---VVSLAMADIM-------VAIMAMTF 209
            ::....:.||||.:..:.|.       |.||.:.:.|   |..|.:.|::       |.:.|...
Human    25 VLFSTGLLGNLLALGLLARSGLGWCSRRPLRPLPSVFYMLVCGLTVTDLLGKCLLSPVVLAAYAQ 89

  Fly   210 NFSVQVTGRWNFSP----FLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVV 270
            |.|::|     .:|    .||..:.....:|..:|.|.|..::::.:.::..|..|...:|.|  
Human    90 NRSLRV-----LAPALDNSLCQAFAFFMSFFGLSSTLQLLAMALECWLSLGHPFFYRRHITLR-- 147

  Fly   271 GIMLLNTWISPALLSF------LPIFIGWYTTPQHQQFVIQNP-TQC---------SFVVNKYYA 319
                |...::|.:.:|      || |:|:      .:||...| |.|         |..|..|..
Human   148 ----LGALVAPVVSAFSLAFCALP-FMGF------GKFVQYCPGTWCFIQMVHEEGSLSVLGYSV 201

  Fly   320 VISSSISFWIPCTIMIFTYLAIFREANRQEKQLMMRHGNAMLMHRPSMQPSGEALSGSGSSKTLT 384
            :.||.::..:..|::  ..|...|......::| .||..:..  |...:|..:....|..    .
Human   202 LYSSLMALLVLATVL--CNLGAMRNLYAMHRRL-QRHPRSCT--RDCAEPRADGREASPQ----P 257

  Fly   385 LHEVEQEHTPTKDKHLIKMKREHKAARTLGIIMGTFILCWLP--FFLWY-------TLSMTCEEC 440
            |.|::         ||:          .|.::...|.:|.||  :..:|       ..:.|.||.
Human   258 LEELD---------HLL----------LLALMTVLFTMCSLPVIYRAYYGAFKDVKEKNRTSEEA 303

  Fly   441 QVPDI-------VVSILF-WIGYFNSTLNPLIYAYFNRDFREAFRNTLLC 482
            :  |:       |:||:. ||  |....:|:...:|::.|....|....|
Human   304 E--DLRALRFLSVISIVDPWI--FIIFRSPVFRIFFHKIFIRPLRYRSRC 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 47/214 (22%)
7tm_1 170..465 CDD:278431 75/348 (22%)
PTGDRNP_000944.1 7tmA_PGD2 17..335 CDD:320268 75/359 (21%)
TM helix 1 18..44 CDD:320268 4/18 (22%)
TM helix 2 61..87 CDD:320268 5/25 (20%)
TM helix 3 105..135 CDD:320268 5/29 (17%)
TM helix 4 147..169 CDD:320268 6/28 (21%)
TM helix 5 195..224 CDD:320268 6/30 (20%)
TM helix 6 258..288 CDD:320268 9/48 (19%)
TM helix 7 302..327 CDD:320268 8/28 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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