DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and cckar

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_697493.2 Gene:cckar / 569038 ZFINID:ZDB-GENE-120404-2 Length:446 Species:Danio rerio


Alignment Length:422 Identity:113/422 - (26%)
Similarity:186/422 - (44%) Gaps:79/422 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 GAG-LSDHHHHQQHNPDE--DWLDNIVWVFKAFVMLLIIIAAICGNLLVIISVMRVRKLRVITNY 190
            |.| ||:..:....:|.|  |....:..|..|    ||.|.:..||.|:|..::|.|::|.:||.
Zfish    24 GIGNLSECKNESTPSPSEPKDMNQTVRIVLYA----LIFILSFLGNSLIIAVLLRNRRMRTVTNL 84

  Fly   191 FVVSLAMADIMVAIMAMTFNFSVQVTGRWNFSPFLCDLWNSLDVYFS----TASILHLCCISVDR 251
            |::|||::|:|:.:..|.|.....:...:.|...:|    .:..||.    :.|.|:|..||::|
Zfish    85 FLLSLAVSDLMLCVFCMPFTLIPNLMKDFIFGSGMC----KVATYFMGISVSVSTLNLVAISLER 145

  Fly   252 YYAIVKPLKYPISMTKRVVGIMLLNTWISPALLSFLPIFIGWYTTPQHQQFVIQNPT---QC--- 310
            |.||..|||.....||.....::..||:...|| .||..||....|    |:..|.:   .|   
Zfish   146 YSAICNPLKSRAWQTKSHAVKVISATWVVSFLL-MLPYPIGSTLVP----FIRSNNSTGNMCRLV 205

  Fly   311 --SFVVNKYYAVISSSISFWIPCTIMIFTY----LAIF---------REANRQEKQLMMRHGNAM 360
              |.|:..:|..:..:: |.:|..||:..|    |.::         |::||:::     :|.:.
Zfish   206 WPSDVMQTWYIFLLLTL-FLVPGIIMMTAYGLTSLELYRGIRFEMTNRKSNREKE-----YGTSS 264

  Fly   361 LMHRPS----MQPSGEALSGSGSSKTLTLHEVEQ-----EHTPTKDKHLIKMKREHKAARTLGII 416
            |.:..|    .|||.:    ..|...:..|...:     .::||  .:|:..||   ..|.|.:|
Zfish   265 LKNGDSDGCYFQPSKK----KRSEPVMPSHPKSKLRRVCSNSPT--ANLMAKKR---VIRMLLVI 320

  Fly   417 MGTFILCWLPFFL---WYTLSMTCEECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFREAFRN 478
            :|.|.|||.|.|:   |........:..:....:|.:..:.|.::.:||::|.:.|:.||:...:
Zfish   321 VGLFFLCWTPVFVVNAWRAFDRRSADSLLSGAPISFIHLLSYTSACVNPIVYCFMNKRFRQGILS 385

  Fly   479 TLLCLFCNWWKDRHLPLDID-IRRSSLRYDQR 509
            |..|  |..        |:| ..|||.|...|
Zfish   386 TFSC--CRG--------DVDEFSRSSTRRSAR 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 57/193 (30%)
7tm_1 170..465 CDD:278431 87/331 (26%)
cckarXP_697493.2 7tm_4 54..>195 CDD:304433 49/153 (32%)
7tm_1 64..372 CDD:278431 87/331 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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