DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Octbeta2R and LOC563567

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_005158584.1 Gene:LOC563567 / 563567 -ID:- Length:447 Species:Danio rerio


Alignment Length:362 Identity:138/362 - (38%)
Similarity:193/362 - (53%) Gaps:33/362 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 ESGAG-LSDHHHHQQHNPDEDWLDNIVWVFKAFVMLLIIIAAICGNLLVIISVMRVRKLR-VITN 189
            |:|.. ..|..|..|...|.|. .|.|.....||:.|:|::.:.||.||..:|::.|.|| .:||
Zfish     8 ENGTNHTQDRAHGAQEREDGDG-QNSVRALLGFVLFLLIVSTLLGNTLVCAAVVKFRHLRSKVTN 71

  Fly   190 YFVVSLAMADIMVAIMAMTFNFSVQVTGRWNFSPFLCDLWNSLDVYFSTASILHLCCISVDRYYA 254
            :||:|||::|:.||::.|.:.....|.|.|.|..| |.:|.:.|:..||||||:||.||||||:|
Zfish    72 FFVISLAVSDLFVAVLVMPWEAISAVAGTWLFGRF-CGIWIAFDIMCSTASILNLCIISVDRYWA 135

  Fly   255 IVKPLKYPISMTKRVVGIMLLNTWISPALLSFLPIFIGWYTTPQHQQFVIQNPT----QCSFVVN 315
            |..|.:|...||.||..:|:...|....|:||:|:.:.|:.....::....|.|    .|...:|
Zfish   136 IASPFRYERKMTHRVAFMMIGVAWTLSILISFIPVQLNWHMADDDEEGAGGNGTDYSDNCKANLN 200

  Fly   316 KYYAVISSSISFWIPCTIMIFTYLAIFREANRQEKQLMMRHGNAMLMHRPSMQPSGEALSGSGSS 380
            :.||:.||.|||:||..|||.||..|||.|..|.:::...  ...:.|..:...|.:. |...|.
Zfish   201 RTYAISSSLISFYIPVIIMIATYTRIFRIAQTQIRRISSL--ERAVEHAQNHHQSNDC-SNENSL 262

  Fly   381 KTLTLHEVEQEHTPTKDKHLIKMKREHKAARTLGIIMGTFILCWLPFFLWYTLSMTCEECQVPDI 445
            ||                   ..|:|.|..:||.||||.|:.||||||:...:...| :| |.|.
Zfish   263 KT-------------------TFKKETKVLKTLSIIMGVFVFCWLPFFVLNCMVPFC-QC-VSDT 306

  Fly   446 VVSILFWIGYFNSTLNPLIYAYFNRDFREAFRNTLLC 482
            ..:|..|.|:.||:|||:||| ||.|||:||.:.|.|
Zfish   307 TFTIFVWFGWANSSLNPVIYA-FNADFRKAFSSILGC 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 75/182 (41%)
7tm_1 170..465 CDD:278431 113/299 (38%)
LOC563567XP_005158584.1 7tmA_D1-like_dopamine_R 35..336 CDD:320185 125/326 (38%)
TM helix 1 36..62 CDD:320185 9/25 (36%)
TM helix 2 70..97 CDD:320185 11/26 (42%)
TM helix 3 107..137 CDD:320185 18/29 (62%)
TM helix 4 149..169 CDD:320185 7/19 (37%)
TM helix 5 200..230 CDD:320185 18/29 (62%)
TM helix 6 267..297 CDD:320185 16/29 (55%)
TM helix 7 305..330 CDD:320185 13/25 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24248
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.