DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and zgc:162592

DIOPT Version :10

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001076297.1 Gene:zgc:162592 / 561993 ZFINID:ZDB-GENE-030131-5400 Length:375 Species:Danio rerio


Alignment Length:419 Identity:98/419 - (23%)
Similarity:158/419 - (37%) Gaps:133/419 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 SSTGGIALPLGTATPATHELNATQPFGGSGLNFNESGAGLSD-HHHHQQHNPDEDWLDNIVWVFK 156
            |.|..:::|                    .::||     ::| |...:.|.|           .|
Zfish     2 SDTTNVSIP--------------------AVDFN-----ITDLHRTLEAHRP-----------IK 30

  Fly   157 AFVMLLIIIAAICGNLLVIISVMRV-----RKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVT 216
            ..::.::.:....||:.|::.:...     |..|    ||::||..||...|::.|..|..|.:.
Zfish    31 IGIISVLGVMITLGNIAVVMVIASAVSGWSRNSR----YFLLSLTGADSAFALLIMPLNLCVSLI 91

  Fly   217 GRWNFSPF-LCDLWNSLDVYFSTASILHLC-----CISVDRYYAIVKPLKYPISMTKRVVGIMLL 275
            ..:|..|. .|.:     |.|..|:|...|     .||::||.|:..||||.:.:|:|...:::.
Zfish    92 KEYNAGPDPFCHI-----VAFFNATIYSTCMYTLATISLERYIAVFYPLKYSVLLTRRRALLLIS 151

  Fly   276 NTWISPALLSFLPIFIGWYTTPQHQQFVIQNPTQCSFVVNKYYAVISSSISF--------WIPCT 332
            .:|:.|.:|.| ||.........|.       ::.|.|.|..|   ||::|:        :.||:
Zfish   152 FSWVFPPVLLF-PISFPAGIIEVHF-------SRASLVCNPLY---SSNVSYSLTLTCFIFFPCS 205

  Fly   333 -IMIFTYLAIFREANRQEKQLMMRH--GNAMLMHRPSMQPSGEALSGSGSSKTLTLHEVEQEHTP 394
             ||.|..|.::..|.||..:| .||  |..   :||.:                           
Zfish   206 AIMTFCNLRLWVAAKRQRSKL-RRHSWGGG---YRPKV--------------------------- 239

  Fly   395 TKDKHLIKMKREHKAARTLGIIMGTFILCWLP---FFLWYTLSMTCEECQVPDIVVSILFWIGYF 456
                          |.|.|..:|..:..||.|   ..|:..:|.:.    ||:.:..|..|:...
Zfish   240 --------------ALRVLVPVMTVYYTCWTPCMVIMLYNAISGSA----VPEWIEFIAVWLPTS 286

  Fly   457 NSTLNPLIYAYFNRDFREAFRNTL--LCL 483
            |..||.:.|.:.|..||:.|...|  |||
Zfish   287 NGFLNCIFYFWINHSFRKKFHVVLQKLCL 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tmA_DmOct-betaAR-like 155..476 CDD:320194 84/345 (24%)
TM helix 1 155..181 CDD:320194 4/25 (16%)
TM helix 2 188..214 CDD:320194 9/25 (36%)
TM helix 3 226..256 CDD:320194 11/34 (32%)
TM helix 4 268..291 CDD:320194 7/22 (32%)
TM helix 5 315..344 CDD:320194 11/37 (30%)
TM helix 6 404..434 CDD:320194 8/32 (25%)
TM helix 7 444..469 CDD:320194 6/24 (25%)
zgc:162592NP_001076297.1 7tm_classA_rhodopsin-like 30..299 CDD:410626 81/337 (24%)
TM helix 1 30..55 CDD:410626 4/24 (17%)
TM helix 2 63..90 CDD:410626 11/30 (37%)
TM helix 3 102..132 CDD:410626 11/34 (32%)
TM helix 4 145..164 CDD:410626 4/19 (21%)
TM helix 5 189..214 CDD:410626 6/24 (25%)
TM helix 6 240..265 CDD:410626 8/24 (33%)
TM helix 7 274..299 CDD:410626 6/24 (25%)

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