DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and nmbr

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_690325.2 Gene:nmbr / 561834 ZFINID:ZDB-GENE-041014-369 Length:372 Species:Danio rerio


Alignment Length:425 Identity:85/425 - (20%)
Similarity:163/425 - (38%) Gaps:87/425 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 DHHHHQQ----HNPDEDWLDN-------IVWVFKAFVMLLIIIAAICGNLLVIISVMRVRKLRVI 187
            ||...:.    .|..|||..:       |:......|.:|||...:.||:.::...:....:|.:
Zfish     2 DHTFSEDTAVYENFTEDWTSDGGETVHFIIQCVIPSVYILIITVGLLGNITLVKIFITTSAMRSV 66

  Fly   188 TNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNFSPFLCDLWNSLDVYFSTASILHLCCISVDRY 252
            .|.|:.|||:.|:::.:..:..:........|.|....|.:...:.:.....|:..|..:|.||:
Zfish    67 PNIFISSLAVGDLLLLVTCVPVDAFRYFYEEWIFGTVACKMIPVIQLTSVGVSVFTLTALSADRH 131

  Fly   253 YAIVKPLKYPISMTKRVVGIMLLNTWISPALLSFLP--IFIGWYTTP-QHQQFVIQNPTQCSFVV 314
            .|||.|:....|.......:..:..|:...||: :|  :|......| ::..|....|...|..:
Zfish   132 KAIVNPMDIQSSSAVFWTCLKAITIWVVSVLLA-IPEAVFSQVVHMPDKNTTFTACVPYPLSNEM 195

  Fly   315 N-KYYAVISSSISFWIPCTIMIFTYLAIFREANRQEKQLMMRHGNAMLMHRPSMQPSGEALSGSG 378
            : |.::::...:.|.||.:|:...|..|.|                      ::..|...:.|. 
Zfish   196 HPKIHSIMIFLVYFLIPLSIISVYYYHIAR----------------------TLIKSAHDMPGE- 237

  Fly   379 SSKTLTLHEVEQEHTPTKDKHLIKMKREHKAARTLGIIMGTFILCWLP---FFLWYTLSMTCEEC 440
                ::.|...|..|            ..:.|:.:.:.:|.|.|||.|   .:::.:.:....:.
Zfish   238 ----ISEHSKRQTET------------RKRLAKIVLVFVGLFALCWFPNHVLYMYRSFNYRQIDS 286

  Fly   441 QVPDIVVSILFWIGYFNST-LNPLIYAYFNRDFREAFRNTLLCLFCNWWKDRHLPLDIDIRRSSL 504
            .:..::::::..:..|:|: :||......:..||..|.|.|||      :.|             
Zfish   287 SLSHLIITLVARVLSFSSSCVNPFALYLLSESFRRHFNNQLLC------RQR------------- 332

  Fly   505 RYDQRAKSVYSESYLNSTT----PSHRRQSQMVDN 535
            :|.:|     :.|||.||:    .|.|:.:..|.|
Zfish   333 KYQER-----NTSYLQSTSAIRMTSIRKSTPAVAN 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 38/181 (21%)
7tm_1 170..465 CDD:278431 55/302 (18%)
nmbrXP_690325.2 7tm_1 49..310 CDD:278431 54/300 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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