DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and opn3

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001104634.1 Gene:opn3 / 561815 ZFINID:ZDB-GENE-080227-16 Length:387 Species:Danio rerio


Alignment Length:437 Identity:106/437 - (24%)
Similarity:186/437 - (42%) Gaps:111/437 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 NFNESGAGLSDHHHHQQHNPDEDWLDNIVWVF--KAFVMLLIIIAAI-----CGNLLVIISVMRV 181
            :|||:              |.|..|:|..::|  :.:.:|...|.:|     |.|::|||...|.
Zfish     3 SFNET--------------PTEAHLENYNYIFADETYKLLTFTIGSIGVLGFCNNIIVIILYSRY 53

  Fly   182 RKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNFSPFLCDLW----NSLDVYFSTASIL 242
            ::||..||..:|:::::|::|::..:.|.|...|..||.|:...| :|    |||   |...||:
Zfish    54 KRLRTPTNLLIVNISVSDLLVSLTGVNFTFVSCVKRRWVFNSATC-VWDGFSNSL---FGIVSIM 114

  Fly   243 HLCCISVDRYYAIV--KPLKYPISMTKRVVGIMLLN-TWISPALLSFLPIFIGW--YTTPQHQ-- 300
            .|..::.:||..:|  |.:.:|.:. :.:..|.|.: .|....||       ||  ||...||  
Zfish   115 TLSGLAYERYIRVVHAKVVDFPWAW-RAITHIWLYSLAWTGAPLL-------GWNRYTLEVHQLG 171

  Fly   301 ---QFVIQNPTQCSFVVNKYYAVISSSISFWIPCTIMIFTYLAIFREANRQEKQLMMRHGNAMLM 362
               .:..::|...||::   :.::.   .|::|..:|::.|                  ||  ::
Zfish   172 CSLDWASKDPNDASFIL---FFLLG---CFFVPVGVMVYCY------------------GN--IL 210

  Fly   363 HRPSMQPSGEALSGSGSSKTLTLHEVEQEHTPTKDKHLIKMKR-EHKAARTLGIIMGTFILCWLP 426
            :...|..|              :.:::...|       ||:.| |.|.|....:::..|::||.|
Zfish   211 YTVKMLRS--------------IQDLQTVQT-------IKILRYEKKVAVMFLMMISCFLVCWTP 254

  Fly   427 FFLWYTLSMTCEECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFREAFRNTLLCLFC------ 485
            :.:...|....::..|...|..|.......::..||:|||:.:|.||..    :|.:.|      
Zfish   255 YAVVSMLEAFGKKSVVSPTVAIIPSLFAKSSTAYNPVIYAFMSRKFRRC----MLQMLCSRLTSL 315

  Fly   486 -NWWKDRHLP-LDIDIR---RSSLRYDQRAKSV-YSESYLNSTTPSH 526
             :..|||.|. ::..||   .|..|.|:..|.| :|.|.:.....||
Zfish   316 QHTIKDRPLSRIEHPIRPIVMSQSRTDRPKKRVTFSSSSIVFIIASH 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 53/196 (27%)
7tm_1 170..465 CDD:278431 71/309 (23%)
opn3NP_001104634.1 7tm_1 43..293 CDD:278431 71/308 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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