DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and htr1b

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001122181.1 Gene:htr1b / 561647 ZFINID:ZDB-GENE-081022-141 Length:380 Species:Danio rerio


Alignment Length:415 Identity:128/415 - (30%)
Similarity:184/415 - (44%) Gaps:75/415 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 NSSTGGIALPLGTATPATHELNATQPFGGSGLNFNESGAGLSDHHHHQQHNPDEDWLDNIVWVFK 156
            |||||...    |.||.|.|...:..|                                  .|..
Zfish    18 NSSTGTNV----TLTPKTDEKQESFAF----------------------------------QVTL 44

  Fly   157 AFVMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNF 221
            :.|:.||.:|.|..|..||.::.:.|||:...|:.:.|||:.|::|:::.|.......||..|..
Zfish    45 SSVLGLITLATILSNAFVIATISQSRKLQTPANFLIASLAVTDLLVSVLVMPICVLYTVTREWTL 109

  Fly   222 SPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWISPALLSF 286
            ...:||:|.|.|:...||||||||.|::|||:||...::|....|:.....|:...||....:|.
Zfish   110 GQVICDIWLSSDITCCTASILHLCVIALDRYWAITDAVEYAKKRTQARAAGMVATAWIIAISISL 174

  Fly   287 LPIFIGWYTTPQHQQFVIQNPTQCSFVVNK---YYAVISSSISFWIPCTIMIFTYLAIFREANRQ 348
            .|.|  |      :|......|.||  ||.   :|.:.|:..:|:||..::|..|..|:.||.::
Zfish   175 PPFF--W------RQVKAGELTTCS--VNTDHIFYTIYSTFGAFYIPTLLLIALYGRIYVEARKR 229

  Fly   349 -EKQLMMRHGNAML-MHRPSMQPSGEA------------LSGSGSSKTLTLHEVEQEHTPTKD-- 397
             .||...:.|..:. .|..:..|:..|            .|.|||     |....|......|  
Zfish   230 ILKQSPKKPGKRLTSAHLSTNSPASVASTSPLHCGRQDLCSDSGS-----LGSDNQIRVTVSDSL 289

  Fly   398 --KHLIKMKREHKAARTLGIIMGTFILCWLPFFLWYTLSMTCEECQVPDIVVSILFWIGYFNSTL 460
              |..|...||.||.:|||||:|.:|:||||||::..|...|..|..|:: .....|:||.||.:
Zfish   290 LEKKRISAARERKATKTLGIILGAYIVCWLPFFIYTLLIPLCSSCFSPEL-FDFFTWLGYVNSLI 353

  Fly   461 NPLIYAYFNRDFREAFRNTLLCLFC 485
            ||:||...|.||::||...:....|
Zfish   354 NPIIYTMSNDDFKKAFHKVISFRCC 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 59/180 (33%)
7tm_1 170..465 CDD:278431 103/315 (33%)
htr1bNP_001122181.1 7tm_1 59..358 CDD:278431 103/314 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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