DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and chrm5b

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001025331.1 Gene:chrm5b / 561491 ZFINID:ZDB-GENE-041001-169 Length:457 Species:Danio rerio


Alignment Length:449 Identity:96/449 - (21%)
Similarity:160/449 - (35%) Gaps:152/449 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 KLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNFSPFLCDLWNSLDVYFSTASILHLCCI 247
            :|:.:.||:::|||.||:::.:.:|.......:.|.|:.....||||.:||...|.||:::|..|
Zfish     9 QLKTVNNYYLLSLAFADLIIGVFSMNLYTCYILMGYWSLGNTACDLWLALDYVASNASVMNLLVI 73

  Fly   248 SVDRYYAIVKPLKYPISMTKRVVGIMLLNTWISPALLSFLPI-----FIGWYTTPQHQQFVIQNP 307
            |.|||::|.:||.|....|.:..|||:...|:...:|...||     |:|....|..|       
Zfish    74 SFDRYFSITRPLTYRAKRTPKRAGIMIGMAWLISFILWAPPILCWQYFVGERKVPLDQ------- 131

  Fly   308 TQCSFVVNKYYAVISSSISFWIPCTIMIFTYLAIFREANRQEKQLMMRHGNAML----------- 361
            .|..|.........::..:|::|.:||...|..|::|..::.|.|....|...|           
Zfish   132 CQIQFFSEPIITFGTAIAAFYVPVSIMTILYCKIYKETEKRTKNLAELQGYPSLDSQDGPKVRKP 196

  Fly   362 ----------------------------------------------------------------- 361
                                                                             
Zfish   197 ILRCFSFKNKRDGTQASWSSSNQSYVTRTTLQSDDLWTKSEQVTTLNSYTSSEDDDRSVSESTPR 261

  Fly   362 ----MHRPSMQPSGE-------------------------------------ALSGSGSSKTLTL 385
                ...|.:..:|:                                     .|.|:..|:....
Zfish   262 ESFKNQEPPVSKNGQLVCYEDSKYLSDLAKCSQTNNKKCLSYKFKPIISDITVLQGNSESERANP 326

  Fly   386 HEVEQEHTP------------------TKDKHLIKMKREHKAARTLGIIMGTFILCWLPFFLWYT 432
            .:...:..|                  ||.|.::.:| |.|||:||..|:..|:|.|.|:.:...
Zfish   327 DQSSDQQAPSSTSSSTKPEDPNLKIQMTKRKRMVLIK-EKKAAQTLSAILLAFLLTWTPYNIMVL 390

  Fly   433 LSMTCEECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFREAFRNTLLCLFCNWWKDR 491
            :|..|..| :|..:..:.:|:.|.|||:||:.||..|:.|::.|   .:.:.|.|.|:|
Zfish   391 ISTFCSNC-IPTSLWQLGYWLCYVNSTVNPMCYALCNKTFQKTF---WMLILCKWKKNR 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 49/163 (30%)
7tm_1 170..465 CDD:278431 87/421 (21%)
chrm5bNP_001025331.1 7tm_1 1..>174 CDD:278431 51/171 (30%)
7tm_4 16..>116 CDD:304433 35/99 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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