DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Octbeta2R and trhra

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_687246.4 Gene:trhra / 558878 ZFINID:ZDB-GENE-100922-18 Length:393 Species:Danio rerio


Alignment Length:369 Identity:87/369 - (23%)
Similarity:150/369 - (40%) Gaps:85/369 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 WLDNIVWVFKAFVMLLIII---AAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMT 208
            |.||.| .:|...:||:|:   ..|.||::||:.|:..:.:|..||.::||||:||:||...|..
Zfish    11 WTDNSV-EYKVVSILLVILICGVGIVGNVMVILVVLTTKHMRTPTNCYLVSLAVADLMVLTAAGL 74

  Fly   209 FNFS-VQVTGRWNFSPFLCDLWNSLDV-YFS----TASILHLCCISVDRYYAIVKPLK----YPI 263
            .|.: :...|:|.:....|     |.: ||.    .||...:...:::||.||..|:|    ..:
Zfish    75 PNITEILFGGQWVYGYAGC-----LSITYFQYLGINASSCSITAFTIERYIAICHPIKAQFMCTL 134

  Fly   264 SMTKRVVGIMLLNTWISPALLSFLPIFIGWYTTPQHQQFVIQNP--TQCSFVVNK------YYAV 320
            |..|:::.::    |:..:|...:     |:.....::.|..|.  ..|.:.|::      |:. 
Zfish   135 SRAKKIIVLV----WVLTSLYCVM-----WFYLLDTREKVYDNAVLVTCGYKVSRELYLPIYFT- 189

  Fly   321 ISSSISFWIPCTIMIFTYLAIFR------------EANRQEKQLMMRHGNAMLMHRPSMQPSGEA 373
             ..::.:.||..:....|..|.|            |:.|..|:....|||               
Zfish   190 -DYAVFYVIPLLLATVLYGLIARILFLNPLPSDPKESRRNWKKESSVHGN--------------- 238

  Fly   374 LSGSGSSKTLTLHEVEQEHTPTKDKHLIKMKREHKAARTLGIIMGTFILCWLPFFLWYTLSMTCE 438
             |.|.|:.|          |....:.:.||         |.:::..|.|.|:|:.....::...:
Zfish   239 -SRSSSNST----------TVASRRQVTKM---------LAVVVILFALLWMPYRTLVVVNSFLK 283

  Fly   439 ECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFREAFRNTLLC 482
            |..:....:.......|.||.:||:||...::.||.||.....|
Zfish   284 EAYLDTCFLLFCRLCIYMNSAINPIIYNAMSQKFRAAFHKLCHC 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 47/198 (24%)
7tm_1 170..465 CDD:278431 71/324 (22%)
trhraXP_687246.4 7tm_4 28..>171 CDD:304433 40/156 (26%)
7tm_1 36..310 CDD:278431 71/324 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.