DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and chrm2b

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_021326218.1 Gene:chrm2b / 555516 ZFINID:ZDB-GENE-090410-3 Length:476 Species:Danio rerio


Alignment Length:504 Identity:122/504 - (24%)
Similarity:186/504 - (36%) Gaps:162/504 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 TATPATHELNATQPFGGSGLNFNESGAGLSDHHHHQQHNPDEDWLDNIVWVFKAFVMLLIIIA-- 166
            |.:|::...|.|..|                     |..|           ||....:||::.  
Zfish     7 TLSPSSSHANKTNIF---------------------QDGP-----------FKPVEFVLIVLGLS 39

  Fly   167 -----AICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNFSPFLC 226
                 .|.||:||::|:...|.|:.:.|||:.|||.||:.:.:.:|.......|||.|.....:|
Zfish    40 ILSLITIIGNVLVMLSIKVNRNLQTVNNYFLFSLACADLFIGVFSMNLYTVYIVTGHWPLGALVC 104

  Fly   227 DLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWI------SPALLS 285
            |||.:||...|.||:::|..||.|||:.:.|||.||:..|.::.|:|:...||      :||:| 
Zfish   105 DLWLALDYVVSNASVMNLLIISFDRYFCVTKPLSYPVKRTHKMAGMMIAAAWILSFILWAPAIL- 168

  Fly   286 FLPIFIGWYTTPQHQQFVIQNPTQCSFVVNKYYAVISSSISFWIPCTIMIFTYLAIF-------- 342
            |.....|..|.|:.:.::       .|..|......::..:|::|...|...|..|.        
Zfish   169 FWQFITGSRTVPEGECYI-------QFFSNAVVTFGTAIAAFYLPVITMTILYWQISKASRSRVR 226

  Fly   343 REANRQEKQLMMRHGNAML-----MHRPSMQ-------------------------PSGE----- 372
            |..||:..::....|.|.|     |.|.|.|                         |:||     
Zfish   227 RRDNRRVSRVSNDGGQAGLGNERNMDRKSTQEGEEMVSRKQSASDTTTGLKISLFPPAGEERDSE 291

  Fly   373 --ALSGS--------------------------------------------GSSKTL-TLHEVEQ 390
              ::|||                                            .|.|.| ..::|..
Zfish   292 NDSISGSVLASSNQRDDEAVSISTNGDIRARQNQSASLATESWVRFTCFKTASQKDLQNTYKVNS 356

  Fly   391 EH------------------TPTKDKHLIKMKREHKAARTLGIIMGTFILCWLPFFLWYTLSMTC 437
            |.                  :|...|......||.|..||:..|:..|...|.|:.:...::..|
Zfish   357 ESQGMTNGKERLSLVSQKIISPHSQKRKSSSSREKKVTRTIMAILVAFATTWTPYNVMVLINTFC 421

  Fly   438 EECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFREAFRNTLLCLFCN 486
            .:| :|:.|....:|:.|.|||:||..||..|..|:..|:..|.|.:.|
Zfish   422 SDC-IPNTVWIFGYWLCYINSTVNPACYALCNVTFKNTFKQLLTCKYRN 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 59/190 (31%)
7tm_1 170..465 CDD:278431 102/408 (25%)
chrm2bXP_021326218.1 7tmA_mAChR_M2 32..459 CDD:320424 109/435 (25%)
TM helix 1 33..59 CDD:320424 8/25 (32%)
TM helix 2 66..92 CDD:320424 9/25 (36%)
TM helix 3 104..134 CDD:320424 15/29 (52%)
TM helix 4 146..169 CDD:320424 7/23 (30%)
TM helix 5 191..220 CDD:320424 6/28 (21%)
TM helix 6 264..418 CDD:320424 22/153 (14%)
TM helix 7 427..452 CDD:320424 10/24 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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