DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and Oamb

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster


Alignment Length:670 Identity:151/670 - (22%)
Similarity:240/670 - (35%) Gaps:266/670 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 EDWLDNIVWVFKAFVMLLII-----IAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAI 204
            ||.:.::.|...|.::.|.:     :..|.||.|||.:|....|||.:||:|:|:||:||::|.:
  Fly     7 EDLIKSVKWTEPANLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGL 71

  Fly   205 MAMTFNFSVQVTGRWNFSPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRV 269
            ..:.|:.:.:|...|.|....|.:|.::||:..|||||:||.||:|||.|:.:|:.||..|:.:.
  Fly    72 AVLPFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKK 136

  Fly   270 VGIMLLNTWISPALLSFLPIFIGW-------------------YTT------------------- 296
            ...::...|:....:.|.|: :||                   |||                   
  Fly   137 AKSLIAGIWVLSFFICFPPL-VGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQG 200

  Fly   297 ----------------------------------------------------------------- 296
                                                                             
  Fly   201 EASLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDL 265

  Fly   297 ------PQHQQFVIQN--PTQCSFVVNKYYAVISSSISFWIPCTIMIFTYLAIFREANR------ 347
                  ||::...|..  |.:|....::.|.:.|:..||:||..:|:|.|..|:|.|.|      
  Fly   266 DLLNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAIN 330

  Fly   348 ----------------QEKQLMMR-------------HGNA-----------------------M 360
                            :|::|.:|             |.|.                       .
  Fly   331 QGFKTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRR 395

  Fly   361 LMHRPSMQ-----PSGE---ALSGSG------------------------SSKTLTLHEVEQEH- 392
            |.|...::     ||.|   .|:|.|                        .|....|:..:|:| 
  Fly   396 LHHHDKIKISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHG 460

  Fly   393 --------------------------------TPTKDK--------HLIKMKREHKAARTLGIIM 417
                                            .|...|        .:.:.:.|.|||:||.||:
  Fly   461 VASSCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIV 525

  Fly   418 GTFILCWLPFFLWYTLSMTCEECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFREAFRNTLLC 482
            |.||.||.|||..|.:...|::| |..::.|:|||:||.||.:||:|||.|::|||.||:..:..
  Fly   526 GMFIFCWCPFFTMYIIRPFCQDC-VDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRIICR 589

  Fly   483 LFCNWWKDRHLPLDIDIRRS-SLRYDQRA---KSVYSESYLNSTTPSHRRQSQMVDNLXYRDEAL 543
            .||:             |:| ||:..:|.   .::...:...|.|||....|...::..:..|..
  Fly   590 CFCS-------------RQSVSLKSSRRGSDMSAIRIRARTPSITPSAAAHSFGDESELHHSEMS 641

  Fly   544 LTPIAQQQQRLAAGGSRLGG 563
            ..|. :.....::..|.|||
  Fly   642 NDPRXRSFGPSSSSQSSLGG 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 66/293 (23%)
7tm_1 170..465 CDD:278431 118/536 (22%)
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 45/124 (36%)
7tm_1 37..>181 CDD:278431 49/144 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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