DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and Octbeta1R

DIOPT Version :10

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_651057.1 Gene:Octbeta1R / 42652 FlyBaseID:FBgn0038980 Length:508 Species:Drosophila melanogaster


Alignment Length:540 Identity:244/540 - (45%)
Similarity:312/540 - (57%) Gaps:85/540 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 LTTLARVTA-AALTTAAMLHTTNALAATGSSSASNSSTGGIALPLGTATPATHELNATQ----PF 118
            :|.|.|:.| :|.||..:|.        ||.|   |..||...||.:..|...| :|:.    .|
  Fly     1 MTLLQRLQAMSATTTRTILE--------GSIS---SFGGGTNEPLASKIPVLEE-SASHARYLKF 53

  Fly   119 GGSGLNFNES-----GAGLS--------------DHHHHQQHNPDEDWLDNIVWVF-KAFVMLLI 163
            ...|| .:|.     |:|.|              |....:....|.|...::..|| |.|::..|
  Fly    54 IADGL-IDEGLGSAVGSGSSIAVSVEDVVAGQAQDIQASEGSTDDADGSSHLALVFVKCFIIGFI 117

  Fly   164 IIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNFSPFLCDL 228
            |:|||.||:|||:||||.||||:||||||||||:||::||:.|||||.||.::|:|.|...:||:
  Fly   118 ILAAILGNMLVIVSVMRHRKLRIITNYFVVSLAVADMLVALCAMTFNASVMISGKWMFGSVMCDM 182

  Fly   229 WNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWISPALLSFLPIFIGW 293
            |||.|||||||||:||||||||||||||:||.||:.||:|.|.||||..|:||||||||||..||
  Fly   183 WNSFDVYFSTASIMHLCCISVDRYYAIVQPLDYPLIMTQRRVFIMLLMVWLSPALLSFLPICSGW 247

  Fly   294 YTTPQHQQFVIQNPTQCSFVVNKYYAVISSSISFWIPCTIMIFTYLAIFREANRQEKQLMMRHGN 358
            |||.::.:::..||..|.|.|||.||::|||:|||||..:|:..|..|::||:|||:.:......
  Fly   248 YTTTENYKYLKSNPHICEFKVNKAYAIVSSSMSFWIPGIVMLSMYYRIYQEADRQERLVYRSKVA 312

  Fly   359 AMLMHR-------PSMQPSGEALSGSGSSKTLTLHEVEQEHTPTKDKHLIKMKREHKAARTLGII 416
            |:|:.:       |..:||               .:|||....|       |:||.|||||||||
  Fly   313 ALLLEKHLQISQIPKPRPS---------------IQVEQSTIST-------MRRERKAARTLGII 355

  Fly   417 MGTFILCWLPFFLWYTLSMTCEECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFREAFRNTLL 481
            |..|::|||||||||.:|..|:.|..|.::|.||||||||||.|||:||||||||||.||:.||.
  Fly   356 MSAFLICWLPFFLWYIVSSLCDSCITPRLLVGILFWIGYFNSALNPIIYAYFNRDFRAAFKKTLK 420

  Fly   482 CL------FCNWWKDRHLPLDIDIRRSSLRYDQRAKSVYSES-----YLNSTTPSHRRQSQMVDN 535
            .|      ||...:.|....|::....|.|....|:...|.|     .:|||..|....|.|   
  Fly   421 SLFPYAFYFCRRGRGRDDDRDLEFGGPSRRGTNGAQRTGSGSAEMANCVNSTASSEIHMSVM--- 482

  Fly   536 LXYRDEAL-LTPI--AQQQQ 552
              .|..|: :||.  ||.||
  Fly   483 -RARQYAVNVTPTTDAQMQQ 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tmA_DmOct-betaAR-like 155..476 CDD:320194 186/328 (57%)
TM helix 1 155..181 CDD:320194 16/26 (62%)
TM helix 2 188..214 CDD:320194 19/25 (76%)
TM helix 3 226..256 CDD:320194 26/29 (90%)
TM helix 4 268..291 CDD:320194 17/22 (77%)
TM helix 5 315..344 CDD:320194 15/28 (54%)
TM helix 6 404..434 CDD:320194 22/29 (76%)
TM helix 7 444..469 CDD:320194 18/24 (75%)
Octbeta1RNP_651057.1 7tmA_DmOct-betaAR-like 109..415 CDD:320194 185/327 (57%)
TM helix 1 109..135 CDD:320194 15/25 (60%)
TM helix 2 142..168 CDD:320194 19/25 (76%)
TM helix 3 180..210 CDD:320194 26/29 (90%)
TM helix 4 222..245 CDD:320194 17/22 (77%)
TM helix 5 269..298 CDD:320194 15/28 (54%)
TM helix 6 343..373 CDD:320194 22/29 (76%)
TM helix 7 383..408 CDD:320194 18/24 (75%)

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