DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and 5-HT2B

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001262373.1 Gene:5-HT2B / 41017 FlyBaseID:FBgn0261929 Length:947 Species:Drosophila melanogaster


Alignment Length:594 Identity:126/594 - (21%)
Similarity:205/594 - (34%) Gaps:188/594 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 FNESGA---GLSDH------------------HHHQQH---------------NPDEDWLDNIVW 153
            :|:||.   ..|:|                  .|:|.|               ..|..:..|..|
  Fly    12 YNDSGGDDWSSSEHLVLWEEDETQRTTANATSRHNQLHVARWNATGNATISATFEDVPFDANNYW 76

  Fly   154 VFKAFVMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGR 218
               |.:.|::::....||:||.:::...|:|:.:||||::|||:.|:|||::.|.......|.|.
  Fly    77 ---ALLALVLVLGTAAGNILVCLAIAWERRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVKGY 138

  Fly   219 WNFSPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWISPAL 283
            :......|..|..|||.|.||||:|||.||||||.::..|:::..:.|:|.|.:.::..|:....
  Fly   139 FPLGSEHCLTWICLDVLFCTASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVFVWLLSIA 203

  Fly   284 LSFLPIFIGWYTTPQHQQFVIQNPTQCSFVVNKYYAVISSSISFWIPCTIMIFTYLAIFREANRQ 348
            :| ||:.:.:  :..|...::....|   :.:..|.::.|.:.|:||..:|:.||....|...||
  Fly   204 MS-LPLSLMY--SKNHASVLVNGTCQ---IPDPVYKLVGSIVCFYIPLGVMLLTYCLTVRLLARQ 262

  Fly   349 EKQLMMRH--------------GNAMLMHRPS-----MQPSGEALSGSG-SSKTLTLHEVEQEHT 393
            .:.|....              |.|..:.|..     ::|      |.| :|..|..|......|
  Fly   263 RQNLGGGQQTAAATPGWASGWLGQAPALERRCTWRRLLKP------GPGNASSVLHAHSANSTDT 321

  Fly   394 --PTKDKHLIKMKREHKAARTLGIIMGTFILCWLPFFLWYTLSMTCEECQVPDIVVSILFWIGYF 456
              .|.|.|.:                      |||                              
  Fly   322 DLSTLDNHEL----------------------WLP------------------------------ 334

  Fly   457 NSTLNPLIYAYFNRDFREAFRNTLLCLFCNWWKDRHLPLDIDIRRSSLRYDQRAKSVYS------ 515
                        :...:|....|:..|.....:...|...::...||.......||.:|      
  Fly   335 ------------DSSIKEPTPTTMTALHQFGAEMLKLSRGLESVASSSTTGSPTKSEFSLSNHLQ 387

  Fly   516 -------ESYLNSTTPSHRRQSQMVDNLXYRDEA------------LLTP---IAQQQQRLAAGG 558
                   :.|..:...||....|......|..:|            |.|.   |.::..|.:...
  Fly   388 LQYPSSPQRYAATHQQSHHHNHQQHPAGVYHQQASPKGRHGTTVLGLSTTTLGIERESTRNSLAS 452

  Fly   559 SRLGGQ------------LAAAAKDGRESKDAKDTGKDAGKGKSNVDCLAGDDVQEIQIEIPMEY 611
            ||:||:            |.|..|..|.|.......|.||.          :|..| .:|.|...
  Fly   453 SRMGGEQSDGTLSQLSQRLRAYKKRRRASSAVPGREKRAGH----------EDADE-DVETPTST 506

  Fly   612 INKWNKNNN 620
            :.:..::|:
  Fly   507 LRRHKRHNS 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 57/177 (32%)
7tm_1 170..465 CDD:278431 77/316 (24%)
5-HT2BNP_001262373.1 7tm_1 90..>262 CDD:278431 58/177 (33%)
7tm_4 90..>238 CDD:304433 50/153 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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