DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and s1pr4

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001112363.1 Gene:s1pr4 / 402857 ZFINID:ZDB-GENE-050506-8 Length:389 Species:Danio rerio


Alignment Length:375 Identity:86/375 - (22%)
Similarity:163/375 - (43%) Gaps:88/375 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 SGAGLSDHH------HHQQHNPDEDWLDNIVWVFKAFVMLLIIIAAICGNLLVIISVM-RVRKLR 185
            |.:.:.:|:      ||::  |.:..:..:..:|..|.:.:|:     .||:|:::|: |||...
Zfish    21 SNSLILEHYNYTGRLHHRK--PSKKSVSAVTVLFLCFSVFIIL-----ENLMVLLAVLFRVRLRH 78

  Fly   186 VITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNF--SPFLCDLWNSLDVYFSTASILHLCCIS 248
            ......:.::|::|::.   ..::..::.::|...|  :|.|......|......|||..|..|:
Zfish    79 RWIFICIANIALSDLLT---GTSYVVNICMSGEQTFRLTPILWLFREGLLFVALAASIFSLLLIA 140

  Fly   249 VDRYYAIVKPLKYPISMTKRVVGIMLLNTWISPALLSFLPIFIGWYTTPQHQQFVIQNPTQCSFV 313
            |:||..::||:....:.....|.||:|..||:..::.|||: :||.        .:.:...||.:
Zfish   141 VERYATMMKPVHQKTATKTYRVYIMMLLCWITAFIIGFLPL-MGWN--------CVCDLRSCSTL 196

  Fly   314 V---NKYYAVISSSISFWIPCTIMIFTYLAIFREANRQEKQLMMRHGNAMLMHRPSMQPSGEALS 375
            :   :|.|.:.:..|.|.|..||.:. |.||:                   .|   ::.|.|.:|
Zfish   197 LPLYSKSYILFALVIFFIILLTIGVL-YFAIY-------------------CH---VRSSTETIS 238

  Fly   376 GSGSSKTLTLHEVEQEHTPTKDKHLIKMKREHKAARTLGIIMGTFILCWLPFFL-----WYTLSM 435
            .....::|.|                        .:.:..|:|.|::||.|.|:     ::..|.
Zfish   239 ARSRKRSLRL------------------------LKAVISIVGVFMVCWGPLFILLLVDFFCYSR 279

  Fly   436 TCEECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFREAFRNTLLCLFC 485
            :|.....|:.|::    :...||.:|||||::.:.:.|:|.. ||||..|
Zfish   280 SCSPLFNPEWVIA----LAVLNSAMNPLIYSFGSLELRKAIA-TLLCCSC 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 46/183 (25%)
7tm_1 170..465 CDD:278431 69/305 (23%)
s1pr4NP_001112363.1 7tm_4 56..>250 CDD:304433 54/257 (21%)
7tm_1 62..305 CDD:278431 69/305 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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