DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and sNPF-R

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001262086.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster


Alignment Length:527 Identity:107/527 - (20%)
Similarity:190/527 - (36%) Gaps:217/527 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 ISYGQSLTTLARVTAAALTTA--AMLHTTN-ALAATGSSSA--------SNSSTGGIALPLGTAT 106
            :|:..::||    |:::::|:  .::.||| :|.:.|::||        ....:|||.       
  Fly     4 LSWLSTITT----TSSSISTSQLPLVSTTNWSLTSPGTTSAILADVAASDEDRSGGII------- 57

  Fly   107 PATHELNATQPFGGSGLNFNESGAGLSDHHHHQQHNPDEDWLDNIVWVFKAFVMLLIIIAAICGN 171
                                              ||       ..|.:|...:...:.:..:.||
  Fly    58 ----------------------------------HN-------QFVQIFFYVLYATVFVLGVFGN 81

  Fly   172 LLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNFSPFLCDLWN---SLD 233
            :||...|:|.|.::.:||.|:.:||::||::.::|:.|.......|||.|...||.|.:   ...
  Fly    82 VLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFMGRWAFGRSLCHLVSFAQGCS 146

  Fly   234 VYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWISPALLSFLPIFIGWY---- 294
            :|.||   |.|..|::|||:.|:.|. :|.......:|| :::.|:. |||:.:|  .|.|    
  Fly   147 IYIST---LTLTSIAIDRYFVIIYPF-HPRMKLSTCIGI-IVSIWVI-ALLATVP--YGMYMKMT 203

  Fly   295 -----------------TTPQHQQFVIQ-----------NPTQCSFVV----------------- 314
                             |...:..||.|           :.||....|                 
  Fly   204 NELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTAGSTGPEMPYVRVYC 268

  Fly   315 ---------NKYYAVISSSISFWIPCTIMIFTYLAIFREANRQEKQLMMRHGNAMLMHRPSMQPS 370
                     .|.:..|::::.|.:|..|:...|:.|..:.|::.:                    
  Fly   269 EENWPSEQYRKVFGAITTTLQFVLPFFIISICYVWISVKLNQRAR-------------------- 313

  Fly   371 GEALSGSGSSKTLTLHEVEQEHTPTKDKHLIKMKREHKAARTLGIIMGTFILCWLP--------- 426
              |..||.||:.   .|.:::             |:.:..|.|..::..|.|.|||         
  Fly   314 --AKPGSKSSRR---EEADRD-------------RKKRTNRMLIAMVAVFGLSWLPINVVNIFDD 360

  Fly   427 --------------FFLWYTLSM--TCEECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFREA 475
                          ||:.::::|  ||                      .||.:||:.|.:||:.
  Fly   361 FDDKSNEWRFYILFFFVAHSIAMSSTC----------------------YNPFLYAWLNENFRKE 403

  Fly   476 FRNTLLC 482
            |::.|.|
  Fly   404 FKHVLPC 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 57/238 (24%)
7tm_1 170..465 CDD:278431 80/380 (21%)
sNPF-RNP_001262086.1 7tm_4 75..>196 CDD:304433 42/128 (33%)
7tm_1 80..393 CDD:278431 80/380 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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