DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and Opn4

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_038915.1 Gene:Opn4 / 30044 MGIID:1353425 Length:521 Species:Mus musculus


Alignment Length:566 Identity:131/566 - (23%)
Similarity:223/566 - (39%) Gaps:126/566 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 AALTTAAMLHTTNALAA--TGSSSASNSSTGGIALPLGTATPAT--HELNATQPFGGSGLNFNES 128
            ::||......|:.||..  .|:.:.|      :...|.:.:|.|  |:..|..||         .
Mouse    11 SSLTQDPSFTTSPALQGIWNGTQNVS------VRAQLLSVSPTTSAHQAAAWVPF---------P 60

  Fly   129 GAGLSDHHHHQQHNPDEDWLDNIVWVFKAFVMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVV 193
            ...:.||.|:.                ...|:||:.:..:.|||.||.:..|.|.||...|.|::
Mouse    61 TVDVPDHAHYT----------------LGTVILLVGLTGMLGNLTVIYTFCRNRGLRTPANMFII 109

  Fly   194 SLAMADIMVAIMAMTFNFSVQVTGRWNFSPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKP 258
            :||::|.::::......|:..:..:|.|....|:.:......|...|::.|..|::|||..|.:|
Mouse   110 NLAVSDFLMSVTQAPVFFASSLYKKWLFGETGCEFYAFCGAVFGITSMITLTAIAMDRYLVITRP 174

  Fly   259 LKYPISMTKRVVGIMLLNTWISPALLSFLPIFIGWYTTPQHQQFVIQN-PTQCSFVVNKY----- 317
            |......:||...::||..|:. ||...||.|.||      ..:|.:. .|.||:....:     
Mouse   175 LATIGRGSKRRTALVLLGVWLY-ALAWSLPPFFGW------SAYVPEGLLTSCSWDYMTFTPQVR 232

  Fly   318 -YAVISSSISFWIPCTIMIFTYLAIFREANRQEKQLMMRHGNAMLMHRPSMQPSGEALSGSGSSK 381
             |.::.....|::|..|:||.|:.|||                      :::.:|.|..|.|.| 
Mouse   233 AYTMLLFCFVFFLPLLIIIFCYIFIFR----------------------AIRETGRACEGCGES- 274

  Fly   382 TLTLHEVEQEHTPTKD-KHLIKMKREHKAARTLGIIMGTFILCWLPF-------FLWYTLSMTCE 438
                        |.:. :...:::.|.|.|:...|::..|:|.|.|:       |..|:..:|..
Mouse   275 ------------PLRQRRQWQRLQSEWKMAKVALIVILLFVLSWAPYSTVALVAFAGYSHILTPY 327

  Fly   439 ECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFREAFRNTLLCLFCNWWKDRHLPLDIDIRRS- 502
            ...||.::...       ::..||:|||..:..:|.|....|.||        .:.|.:..:|| 
Mouse   328 MSSVPAVIAKA-------SAIHNPIIYAITHPKYRVAIAQHLPCL--------GVLLGVSGQRSH 377

  Fly   503 -SLRYDQRAKSVYSESYLNSTTPSHRRQSQMV---DNLXYRDEALLTPIAQQQQRLAAGGSRLG- 562
             ||.|....:|..|....:.:..|.|::.:.:   ..:.:.|..........||  |:|.|... 
Mouse   378 PSLSYRSTHRSTLSSQSSDLSWISGRKRQESLGSESEVGWTDTETTAAWGAAQQ--ASGQSFCSQ 440

  Fly   563 ----GQL-AAAAKDGRESKDAKDTGKDA-----GKGKSNVDCLAGD 598
                |:| |:::...:.||..|..|...     |:| :....|.||
Mouse   441 NLEDGELKASSSPQVQRSKTPKVPGPSTCRPMKGQG-ARPSSLRGD 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 51/184 (28%)
7tm_1 170..465 CDD:278431 75/309 (24%)
Opn4NP_038915.1 7tm_4 77..>244 CDD:304433 47/173 (27%)
7tm_1 86..347 CDD:278431 75/309 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 445..486 12/42 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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