DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and Taar4

DIOPT Version :10

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001008499.1 Gene:Taar4 / 209513 MGIID:2685072 Length:347 Species:Mus musculus


Alignment Length:329 Identity:111/329 - (33%)
Similarity:168/329 - (51%) Gaps:50/329 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 MLLIIIAAI----CGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWN 220
            |.||:|.||    .||:.||||:...::|...||:.::|:|..|.:::.:.|.|:....:...|.
Mouse    36 MYLIMIGAIVMTMLGNMAVIISIAHFKQLHSPTNFLILSMATTDFLLSCVVMPFSMIRSIESCWY 100

  Fly   221 FSPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWISPALLS 285
            |....|.:.:..|:...|.||.|||.|||||:||:..||.|...:|.||||:.||.:|..|...:
Mouse   101 FGDLFCKVHSCCDIMLCTTSIFHLCFISVDRHYAVCDPLHYVTQITTRVVGVFLLISWSVPIFFA 165

  Fly   286 FLPIF-----IGWYTTPQHQQFV--IQNPTQCSFVVNKYYAVISSSISFWIPCTIMIFTYLAIFR 343
            |..:|     ||      .:.||  |.....|..:.||.:.|::|.|:|::|.|:|:..|:.||.
Mouse   166 FGLVFSELNLIG------AEDFVAAIDCTGLCVLIFNKLWGVLASFIAFFLPGTVMVGIYIHIFT 224

  Fly   344 EANRQEKQLMMRHGNAMLMHRPSMQPSGEALSGSGSSKTLTLHEVEQEHTPTKDKHLIKMKREHK 408
            .|.:..:|:                       |:|......|.|.:.:.|         .|:|.|
Mouse   225 VAQKHARQI-----------------------GTGPRTKQALSESKMKAT---------SKKESK 257

  Fly   409 AARTLGIIMGTFILCWLPFFLWYTLSMTCEECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFR 473
            |.:||.|:||.|:|||||||: .|::....:...|:.:.::..|:||||||.||:||..|...||
Mouse   258 ATKTLSIVMGVFVLCWLPFFV-LTITDPFIDFTTPEDLYNVFLWLGYFNSTFNPIIYGMFYPWFR 321

  Fly   474 EAFR 477
            :|.|
Mouse   322 KALR 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tmA_DmOct-betaAR-like 155..476 CDD:320194 109/326 (33%)
TM helix 1 155..181 CDD:320194 12/24 (50%)
TM helix 2 188..214 CDD:320194 7/25 (28%)
TM helix 3 226..256 CDD:320194 15/29 (52%)
TM helix 4 268..291 CDD:320194 10/27 (37%)
TM helix 5 315..344 CDD:320194 12/28 (43%)
TM helix 6 404..434 CDD:320194 18/29 (62%)
TM helix 7 444..469 CDD:320194 11/24 (46%)
Taar4NP_001008499.1 7tmA_TAAR2_3_4 34..324 CDD:320437 109/326 (33%)
TM helix 1 35..61 CDD:320437 12/24 (50%)
TM helix 2 68..94 CDD:320437 7/25 (28%)
TM helix 3 106..136 CDD:320437 15/29 (52%)
TM helix 4 148..171 CDD:320437 9/22 (41%)
Extracellular Loop 2 (ECL2). /evidence=ECO:0000250|UniProtKB:Q5QD04 175..188 5/18 (28%)
TM helix 5 196..225 CDD:320437 12/28 (43%)
TM helix 6 253..283 CDD:320437 18/30 (60%)
TM helix 7 292..317 CDD:320437 11/24 (46%)

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