DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and dop-3

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001024908.2 Gene:dop-3 / 188499 WormBaseID:WBGene00020506 Length:607 Species:Caenorhabditis elegans


Alignment Length:616 Identity:144/616 - (23%)
Similarity:202/616 - (32%) Gaps:291/616 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 QQHNPD-EDWLDNIVWVFKAFVML-LIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIM 201
            |.|..| |..|..::|...|.|.| |:...|:.||:|||:||.|.|.|:.:||..:||||::|.|
 Worm     5 QHHVTDIESPLMVVLWRVAAGVFLPLVPTMAVFGNVLVIMSVFRERSLQTVTNMLIVSLAVSDFM 69

  Fly   202 VAIMAMTFNFSVQVTG-RWNFSPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYP--- 262
            |||..|:|....:... :|....|.|.::.:|||..||||||:|..||:|||.||..|:.|.   
 Worm    70 VAIGVMSFGVYYEWNDFKWGLGSFFCHVYQALDVACSTASILNLLAISLDRYIAIGHPISYAQYG 134

  Fly   263 -------ISMTKRVVGIMLLNTW-ISPALLSFLPIFIGWYTTPQHQQFVIQNPTQCSFVVNKYYA 319
                   ||:|  :|       | :|.|:.  ||:.:|  ..|..     :|..|...:.|.|:.
 Worm   135 ARGGRAMISIT--IV-------WGVSVAVA--LPLLLG--VNPME-----ENDLQECELANPYFN 181

  Fly   320 VISSSISFWIPCTIMIFTYLAIFREANRQEKQLMMRH--------------GNAMLMHR------ 364
            :|||..||:|||..||..|..|||...::|:...:|.              |.|.:..:      
 Worm   182 MISSIFSFFIPCIAMIILYTIIFRRLRQRERARSLRQAQRSENDKISSALLGGAQIARQMGKHFK 246

  Fly   365 -----------------PSMQPSGE----------------------------ALSGSGSSKTLT 384
                             |:|..|.|                            |:...||...||
 Worm   247 NRTDQILLEISFQTSSFPTMSESSEDASTISPMINSFNNFLPKKTPYPSTSIPAIPECGSMPNLT 311

  Fly   385 L------------------------------------------------------------HEVE 389
            :                                                            |..|
 Worm   312 IIERPEAEKEKEISIMDLRDTVEMLDDKYSSAILTSFQTSRSFGEELEEILPFIDGSNSVKHSRE 376

  Fly   390 QEHT------------------------------------------------------------- 393
            |.||                                                             
 Worm   377 QLHTTRSNTSTTRLLDVKPELRSISVPSIQDEKKLSQKSNDLPFSHQNGTHKQKLLPNPGILMKS 441

  Fly   394 -------------------------------------------------------------PTKD 397
                                                                         |...
 Worm   442 KSTTLLKTNGYMDTDSLNRNSHKKSLADLLANDEFSFSDSMRVYKNRLFKSLSRATSGWNKPRPS 506

  Fly   398 KHLIK-----MKREHKAARTLGIIMGTFILCWLPFFLWYTLSMTC------EECQVPDIVVSILF 451
            :|::|     |:|||||..||.:::..|:.||||||:.:..:..|      ..| |..:.:.:..
 Worm   507 RHMVKKATKQMRREHKATVTLAVVLAVFLFCWLPFFVLHLSNSICLIIDENSAC-VGFLPLYLAT 570

  Fly   452 WIGYFNSTLNPLIYAYFNRDFREAFRNTLLC 482
            |:||.||:||||||..|::.||.||||.|.|
 Worm   571 WLGYLNSSLNPLIYTVFDQRFRNAFRNILSC 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 72/189 (38%)
7tm_1 170..465 CDD:278431 122/564 (22%)
dop-3NP_001024908.2 7tm_4 36..>203 CDD:304433 71/184 (39%)
7tm_1 38..>204 CDD:278431 71/183 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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