DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and npr-20

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_495888.3 Gene:npr-20 / 188226 WormBaseID:WBGene00011578 Length:410 Species:Caenorhabditis elegans


Alignment Length:392 Identity:92/392 - (23%)
Similarity:160/392 - (40%) Gaps:87/392 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 VMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVT----GRW 219
            :..|:.:..:.||.|.:|.:.....:|..||:|:.:||:||::|||..:..|. :.:.    |.|
 Worm    36 IYCLVFVVCLSGNFLTLIVMTSHPMMRTPTNFFLSNLAIADLLVAIFCILQNM-IHIVGFDHGNW 99

  Fly   220 NFSPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWISPALL 284
            ...|.:|.|:..|.......|...|..:|:::|.|::.||.....:|.....:..:..|:...|:
 Worm   100 PLGPVMCKLYLGLTNIMPCTSAGILVLVSLEKYIAVLHPLSGLKLLTPEHRWVATMIVWVISILV 164

  Fly   285 SFLPIFIGWYTTPQHQQFVIQNPTQCSFVVNKYYAV---------ISSSISF--W--IPCTIMIF 336
            :| |.|:           ..||.|        |..|         |.:|.||  |  ||.|.::|
 Worm   165 NF-PYFL-----------YAQNYT--------YLGVSACFRGSMPIWNSFSFIVWYLIPLTALVF 209

  Fly   337 TYLAIFR-----EANRQEKQLMMRHGNAMLMHRPSMQPSGEALSGSGSSKT-------------L 383
            .|..|..     ::|||..             |.|.:.:|....|:|.:.|             :
 Worm   210 IYSRISHLLWTSDSNRQSS-------------RQSHESNGSLERGNGYANTAQPGSSWQMKNGRI 261

  Fly   384 TLHEVEQ-EHTPTKDKHLIKMKR------EHKAARTLGIIMGTFILCWLPFF--LWYTLSMTCEE 439
            .:::.|. .:.|.::|.:.:.||      ..|..|.|..::.:|.|...|..  |.||...|...
 Worm   262 VVYKQESLLNVPKREKKVKEPKRPKDTEGRRKVVRLLVAVVVSFALLTFPHHARLLYTSFQTGTI 326

  Fly   440 CQVPDIVV----SILFWIGYFNSTLNPLIYAYFNRDFREAFRNTLLC---LFCNWWKDRHLPLDI 497
            |.....::    |.:|.  :.:|.:||::||..::.||.|..:.:.|   :|....:.|:..|..
 Worm   327 CNSNWTMIFQPLSYIFL--FISSAINPILYACLSKRFRNALSDVIHCRKGVFSRISRSRNRTLVS 389

  Fly   498 DI 499
            |:
 Worm   390 DV 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 50/194 (26%)
7tm_1 170..465 CDD:278431 81/342 (24%)
npr-20NP_495888.3 7tmA_Trissin_R 32..365 CDD:320140 86/364 (24%)
TM helix 1 33..57 CDD:320140 5/20 (25%)
TM helix 2 66..88 CDD:320140 9/21 (43%)
TM helix 3 107..129 CDD:320140 4/21 (19%)
TM helix 4 152..168 CDD:320140 3/16 (19%)
TM helix 5 189..212 CDD:320140 9/22 (41%)
TM helix 6 292..317 CDD:320140 6/24 (25%)
TM helix 7 333..358 CDD:320140 7/26 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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