DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and npr-6

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_509725.2 Gene:npr-6 / 185623 WormBaseID:WBGene00009619 Length:402 Species:Caenorhabditis elegans


Alignment Length:448 Identity:99/448 - (22%)
Similarity:176/448 - (39%) Gaps:130/448 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 QHNPDEDWLDNIVWVFKAFVMLL---IIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIM 201
            ::||.|      :..|:.|.:.:   :.:.|..||.||:..||..::::.|||.|:.:||::|||
 Worm    27 KNNPME------MEYFRPFFISMYCAVFLVASSGNFLVVYVVMTNKRMQTITNIFITNLAVSDIM 85

  Fly   202 VAIMAMTFNFSVQVTGRWNFSPFLC---DLWNSLDVYFSTASILHLCCISVDRYYAIVK-----P 258
            |...::....:....|.|.|...||   .|:....::.||.:   |..|::|||..||.     .
 Worm    86 VNFTSLWLTPTYTSIGHWIFGGGLCHGLPLFQGTSIFISTWT---LTAIAIDRYIVIVHNSSNIN 147

  Fly   259 LKYPISMTKRVVGIMLLNTWISPALLSFLPIFIGWYTTPQHQQFVIQNPTQCSFVV--------- 314
            :...:||...:..|:|:  |:. :||...|..|.......|:        .|.|::         
 Worm   148 INDRMSMRSCLSFIVLI--WLC-SLLLVTPYAINMKLNYIHE--------PCDFLICSEDWSNAE 201

  Fly   315 -NKYYAVISSSISFWIPCTIMIFTYLAIFREANRQEKQLMMRHGNAMLMHRPSMQPSGEALSGSG 378
             ...:.::...:.|.:|..::..:|:.|:                ..|..|.||           
 Worm   202 FRSIFGIVVMILQFILPFVLIAISYIKIW----------------LFLNSRQSM----------- 239

  Fly   379 SSKTLTLHEVEQEHTPTKDKHLIKMKREHKAARTLGIIMGTFILCWLPFFLWYTLSMTCEECQVP 443
                            |:.|..||.|:  :..|.|.:::..|.:||.||.|     :.|    :.
 Worm   240 ----------------TERKSDIKRKK--RLLRMLIVMVVIFAICWFPFNL-----LNC----LR 277

  Fly   444 DIVVSILFWIGYFN-------------STLNPLIYAYFNRDFREAFRNTLLCLFCNWWKDRHLPL 495
            |:.:. .|..|||:             :..||::||:.|..|||.|...:.|||..  :....|:
 Worm   278 DLKLD-NFMRGYFSFVFLSVHLMSMTATAWNPILYAFMNETFREEFAKVVPCLFAR--RPGTGPI 339

  Fly   496 DIDIRRSSL------------RYDQRAKSVYSESYLNSTTPSHRRQSQMVDNLXYRDE 541
            .:...|:::            :.:::..:|.|||.|.:.....|       ::.|.||
 Worm   340 RVITERTAMITNPFRRANRKKKVEEQPVTVISESPLQTAVEPQR-------SIVYLDE 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 47/195 (24%)
7tm_1 170..465 CDD:278431 72/325 (22%)
npr-6NP_509725.2 7tmA_NPYR-like 39..322 CDD:320331 80/351 (23%)
TM helix 1 40..64 CDD:320331 6/23 (26%)
TM helix 2 73..95 CDD:320331 8/21 (38%)
TM helix 3 111..133 CDD:320331 5/24 (21%)
TM helix 4 159..175 CDD:320331 5/18 (28%)
TM helix 5 204..227 CDD:320331 2/22 (9%)
TM helix 6 250..275 CDD:320331 8/31 (26%)
TM helix 7 290..315 CDD:320331 4/24 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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