Protein Alignment Octbeta2R and pcdr-1

DIOPT Version :9

• Sequence 1: NP_001163596.2
• Gene: Octbeta2R / 41549
• FlyBaseID: FBgn0038063
• Length: 630
• Species: Drosophila melanogaster
• Sequence 2: NP_510580.1
• Gene: pcdr-1 / 181656
• WormBaseID: WBGene00010329
• Length: 318
• Species: Caenorhabditis elegans
• Alignment Length: 360
• Identity: 74/360 - (20%)
• Similarity: 134/360 - (37%)
• Gaps: 82/360 - (22%)

  Fly   156 KAFVMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWN 220
            :|.::|.:.:.....::|.|..:.....|..:...:::||::||::.||..:..:....:.|.|.
 Worm    17 RASLILAVDLLLFVTSILNITVIAFTPDLSDVIGCYLISLSVADLLTAIFVIPLSIYSTLEGNWR 81

  Fly   221 F---SPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKY-PISMTKRVVGIMLLNTWISP 281
            .   :..:|.....|.:....:::.....|.:|||.|::||.:| ..|:|:....|:.  :|::.
 Worm    82 IGGDNSIICKSAAYLQIALFCSTVYTFAWICIDRYSAMMKPSRYSEQSLTRCKCWIVF--SWLTS 144

  Fly   282 ALLSFLPIFIGWYTTPQHQQFVIQNPTQCSFVVNKYYAVISSSISF----WIPCTIMIFT----- 337
            .||. .||.:.      ..|.|.....|  ..|..:.|..:.|::.    ::|..:.:|.
 Worm   145 MLLC-CPIIVA------RMQVVFYPDAQ--LCVLDWSATSAYSVTLLLLVFVPTLVTVFNTGWKI 200

  Fly   338 YLAIFREANRQEKQLMMRHGNAMLMHRPSMQPSGEALSGSGSSKTLTLHEVEQEHTPTKDKHLIK 402
            :.|:...|...:.|.|                               |.|.:.....|
 Worm   201 WSAMRNPAALDDSQRM-------------------------------LVETDPNFVLT------- 227

  Fly   403 MKREHKAARTLGIIMGTFILCWLPFFLWYTLSMTCEECQVP-DIVVSIL----FWIGYFNSTLNP 462
                       |.:..||.|.|||..   ||.: ||....| |:.:|:|    .|:.........
 Worm   228 -----------GFLFVTFFLSWLPLI---TLKV-CELIWGPFDMDLSMLTFFFVWLAVSGPCCKF 277

  Fly   463 LIYAYFNRDFREAFRNTLLCLFCNWWKDRHLPLDI 497
            |||.:.|..||.:|.:.:.|..|...:.|:...||
 Worm   278 LIYMFTNHQFRRSFLSYISCSMCCSSRSRYEYHDI 312

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Octbeta2R	NP_001163596.2	7tm_4	164..>342	CDD:304433	38/190 (20%)
		7tm_1	170..465	CDD:278431	61/312 (20%)
pcdr-1	NP_510580.1	7tm_classA_rhodopsin-like	17..284	CDD:381740	65/330 (20%)
		TM helix 1	17..41	CDD:381740	4/23 (17%)
		TM helix 2	50..72	CDD:381740	6/21 (29%)
		TM helix 3	91..113	CDD:381740	2/21 (10%)
		TM helix 4	135..151	CDD:381740	4/18 (22%)
		TM helix 5	175..198	CDD:381740	3/22 (14%)
		TM helix 6	224..246	CDD:381740	10/42 (24%)
		TM helix 7	259..284	CDD:381740	6/24 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910