DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and dop-6

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001359889.1 Gene:dop-6 / 180706 WormBaseID:WBGene00016037 Length:692 Species:Caenorhabditis elegans


Alignment Length:719 Identity:154/719 - (21%)
Similarity:241/719 - (33%) Gaps:296/719 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 EDWLDNIVWVFKAFVMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTF 209
            ||.|....|.:  .|:.::.:..|.|||:|:.:|...:.|:..||:.:|||||||::|....|.|
 Worm    16 EDELLQPEWAY--LVLSIVPLVCILGNLMVVAAVWTTKSLQTPTNHLLVSLAMADLIVGAFVMPF 78

  Fly   210 NFSVQVTG-RWNFSPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIM 273
            :..:.|.. .|:...|:|..:..|||..||:||:||..||:||..|..||.:|.....::.|.:.
 Worm    79 SIYLSVNRLHWHLPLFVCYFYCVLDVAASTSSIIHLVLISIDRLVAATKPAEYKTVKHRKRVYLA 143

  Fly   274 LLNTWISPALLSFLPIFIGWYTTPQHQQFVIQNPTQCSFVVNKYYAVISSSISFWIPCTIMIFTY 338
            :..|||....|| ||:..|:.|...: ..||::  .|. :.|..|.:.||..:|::||.||||||
 Worm   144 IAITWIFSIALS-LPLGTGFNTRTSY-FLVIEH--HCG-IYNPIYMLGSSIFAFYLPCLIMIFTY 203

  Fly   339 LAIFREANRQ---------------------------------------------EKQLMMRHGN 358
            ..||....::                                             ||.|:.:...
 Worm   204 GYIFYTLRKRLRAIQLQEMAGGQFLGFGADVSNITTSAIQSVIGIAPKNRNMITWEKPLLKKIEE 268

  Fly   359 AMLMHRPSMQPSG--------EAL--SGSGSSKTLTLHE-------------------------- 387
            ....|..|:..|.        ||:  |.|||.:..|:.|                          
 Worm   269 TAAEHASSLNDSEREQLQTILEAVHPSSSGSQENTTIEEDPDRPPSVLLEAVTLKCEIDTSGPIL 333

  Fly   388 --------------------------------------VEQEHTP-----------TKDKHLIK- 402
                                                  ....|.|           :|..|.:| 
 Worm   334 ELPRPTYTKNMSRRFSDAVNSISSRGRMKSVSFGTSRKRRHSHQPQGNREVVTSEESKKLHSLKP 398

  Fly   403 ----------------------------------------------------------------- 402
                                                                             
 Worm   399 PLVEKRKMRRLSEMISDWERPSRSSISNMYLYARRESVYIARKKLAGLKDWALDLLAKLKSKQGM 463

  Fly   403 -MKREHKAARTLGIIMGTFILCWLPFFLWYTLSMTCEECQVPDIVVSI--------LFW---IGY 455
             ::||.:|.:.:..:|..|::||||||   ||:|    .::..::.::        ..|   :||
 Worm   464 AIRRETRATKLVATVMVVFLVCWLPFF---TLNM----IKIYKLIFNVWSADLEIWFHWFTALGY 521

  Fly   456 FNSTLNPLIYAYFNRDFREAFRNTLLCLFCNWWKDRHLPLDIDIRRSSLRYDQRAKS-------- 512
            .||:||..||:..|..||.:||..|                 ..||||.|  ||.||        
 Worm   522 LNSSLNFFIYSTINPKFRHSFRRLL-----------------GFRRSSRR--QREKSWMLPPRDS 567

  Fly   513 ------------VYSESYLNSTT---PSHRRQSQMVDNLXYRDEALLTPIAQQQQRLAAGGSRLG 562
                        ...:|.|..|:   |.:.|:..|     .:.|.::..|:..:..::|||:   
 Worm   568 SRGPAKCGCGFHKIVKSPLRKTSSAGPMNNRKISM-----QKPEIVIDEISPNRISISAGGN--- 624

  Fly   563 GQLAAAAKDGRESKDAKDTGKDAGKGKSNVDCLAGDDVQEI-QIEIPMEYINKWNKNNNAAASTA 626
                   ...|.|.|               ||:.....:.| .|.:|.:..|...:.:..:.|:|
 Worm   625 -------TTFRRSSD---------------DCIRRSSSEIIGGITLPSQSSNDKRRGSGMSNSSA 667

  Fly   627 SSHV 630
            |.|:
 Worm   668 SLHI 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 66/178 (37%)
7tm_1 170..465 CDD:278431 107/503 (21%)
dop-6NP_001359889.1 7tmA_amine_R-like 24..>217 CDD:320098 70/199 (35%)
TM helix 1 25..49 CDD:320098 7/25 (28%)
TM helix 2 58..80 CDD:320098 11/21 (52%)
TM helix 3 97..119 CDD:320098 10/21 (48%)
TM helix 4 142..158 CDD:320098 6/16 (38%)
TM helix 5 181..204 CDD:320098 11/22 (50%)
7tm_GPCRs <464..542 CDD:391938 26/84 (31%)
TM helix 6 466..496 CDD:341315 14/36 (39%)
TM helix 7 513..535 CDD:341315 9/21 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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