DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and tkr-3

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001343603.1 Gene:tkr-3 / 177285 WormBaseID:WBGene00006428 Length:400 Species:Caenorhabditis elegans


Alignment Length:459 Identity:110/459 - (23%)
Similarity:180/459 - (39%) Gaps:102/459 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 TATPATHELNATQPFGGSGLNFNESGAGLSDHHHHQQHNPDEDWLDNIVWVFKAFVMLLIIIA-- 166
            :||.:......|...||:|:......|.||......:..|    ::.|:|     .||..|||  
 Worm     4 SATDSILASTITTVIGGAGVLAEAGEAELSGDDDFYELTP----VELIIW-----CMLYAIIAFM 59

  Fly   167 AICGNLLVI-ISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNFSPFLCDLWN 230
            |:.|||||: |::.|:| :|.||.||:::|..||:...|.|:.|.|...:...|.....||.:..
 Worm    60 AVVGNLLVLYITLFRLR-VRSITTYFILNLGFADLFTGIFAIPFKFQAALFQEWFLPRSLCRIVP 123

  Fly   231 SLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWISPALLSFLP--IFIGW 293
            .::....|.|:..|...:|..:..:.  ......|:.|.....:|..||...|:| ||  :|...
 Worm   124 YVETVALTVSVFTLVTSAVHEFRTMF--FSKCSQMSPRSAKRCVLLIWIMAVLVS-LPHGLFHNT 185

  Fly   294 YTTPQHQQFVIQNPTQCSFVVN-----KYYAVISSSISFWIPCTIM--IFTYLAI------FREA 345
            |..|......|   .||..|..     |.|.|....|.:::|..|:  .:|.:|:      ....
 Worm   186 YEFPDDNNTSI---VQCLPVYPDAGWWKTYNVYLVIIQYFVPMIILDTAYTMIAVKIWSLSQSRV 247

  Fly   346 NRQEKQLMMRHGNAMLMHRPSMQPSGEALSGSGSSKTLTLHEVEQEHTPTKDKHLIKMKREHKAA 410
            ...|.::..:..:.:.|..|:.|.|                                     :..
 Worm   248 ELDETKMATQKISVVSMVSPNTQLS-------------------------------------QLM 275

  Fly   411 RTLGIIMGTFILCWLPFFLWYTLSMTCEECQVPDI----VVSILF----WIGYFNSTLNPLIYAY 467
            |||.|::..|.|||.|...:..|:    |.: |:|    .::::|    |:...||.|||:||..
 Worm   276 RTLIIVVACFSLCWFPLETYLLLN----ELK-PEINGWKYINLVFFFSHWLAMSNSCLNPIIYGL 335

  Fly   468 FNRDFREAFRNTLLCLFCNWWKDRHLPLDIDIRRSSLRYDQRAKSVYSESYLNSTTPSHRRQ--S 530
            :|..:.|.:|.....:.|.|.:.:.|.       .|::.::|         .||:.....:|  .
 Worm   336 YNTKYNEEYRRLFRQIGCIWQRQKSLD-------DSMKPERR---------WNSSNDCQDQQEID 384

  Fly   531 QMVD 534
            |:||
 Worm   385 QIVD 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 55/195 (28%)
7tm_1 170..465 CDD:278431 76/318 (24%)
tkr-3NP_001343603.1 7tm_GPCRs 47..344 CDD:391938 88/350 (25%)
TM helix 1 48..74 CDD:341315 13/30 (43%)
TM helix 2 81..106 CDD:341315 10/24 (42%)
TM helix 3 119..149 CDD:341315 5/29 (17%)
TM helix 4 160..181 CDD:341315 7/21 (33%)
TM helix 5 209..238 CDD:341315 8/28 (29%)
TM helix 6 254..299 CDD:341315 13/81 (16%)
TM helix 7 312..337 CDD:341315 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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