DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and npr-34

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_497057.2 Gene:npr-34 / 175131 WormBaseID:WBGene00013187 Length:613 Species:Caenorhabditis elegans


Alignment Length:512 Identity:103/512 - (20%)
Similarity:183/512 - (35%) Gaps:136/512 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 FVMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNFS 222
            |:.|.:.:....||.:||..|.|.:::|.:||.|:.||:.||:.:....:...|...::..|:..
 Worm    77 FLYLTVFLVGTIGNSMVIFVVNRFKRMRNVTNIFLASLSTADLCLIWFCVPIMFMKYMSHTWSMG 141

  Fly   223 PFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLK----YPISMTKRVVGIMLLNTWISPAL 283
            .|.|...:.:..:....|:|.:..||.:|:.||..|::    ..|...|:|:    |..|:|.|:
 Worm   142 RFACYSVHYIQQFTCFCSVLTMTMISFERFLAIAYPMRNIWFSSIGRAKKVI----LLIWMSSAV 202

  Fly   284 LS--------------------------FLPIFIGWYTTPQHQQFVIQNPTQCSFVVNKYYAVIS 322
            |:                          |...|:|:..|.                :||.||:..
 Worm   203 LAVPTAVRMDYETNLSLSGQRVHWCRRRFPAQFLGYPRTS----------------LNKAYAMYQ 251

  Fly   323 SSISFWIPCTIMIFTYLAIFREANRQEK------QLMMRHGNAMLMHRPSMQPSGEALSGSGSS- 380
            ..:....|...|...|..:.....:..|      |.|:....|          :.:|::.||.| 
 Worm   252 LLLLIIFPVLTMSICYARVSAIVYKSSKDRVILSQAMVAFSKA----------ATDAVTFSGYSA 306

  Fly   381 --KTLTLHEVEQEHTPTKDKHLIKMKREHKAARTLGIIMGTFILCWLPFFLWYTLSMTCEECQVP 443
              ...|...::..:|..|.....:..|..:|.:...:.|...|:|      .||:      |.:|
 Worm   307 IPMITTSRNLKTANTTIKSYSNHRNNRVAEANKKQIVQMLISIVC------MYTV------CWLP 359

  Fly   444 DIVVSILFWIGY----------------FN------STLNPLIYAYFNRDFREAFRNTLLCLFCN 486
            .||..:|...||                ||      |.:||::||:.:::||..|:.....:   
 Worm   360 TIVDELLTSFGYICRTSNTQTLKHMRMGFNALTYCQSCINPILYAFISQNFRSTFKTAYSRM--- 421

  Fly   487 WWKDRHLPLDIDIRRSSLRYDQRAKS---VYSESYLNSTTPSHRRQSQMVDNLXYRDEALLTP-- 546
                          :|.|:..:..:|   ..|.:.:.||...||......:.|.....:::||  
 Worm   422 --------------KSRLQGVEEMRSRMGSCSSASMMSTRNQHRIYGSSFNTLTVPGRSMITPNM 472

  Fly   547 ---IAQ-------QQQRLAAGGSRLGGQLAAAAKDGRESKDAKDTGKDAGKGKSNVD 593
               ::|       .|.......|.:.|...:.....| .:...|...|:|:.:|..|
 Worm   473 SRDVSQLSLCRPTSQMSFCRPKSPMAGDSPSTFMRHR-PRSPTDVSHDSGRPRSPTD 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 45/207 (22%)
7tm_1 170..465 CDD:278431 75/355 (21%)
npr-34NP_497057.2 7tmA_GPRnna14-like 75..414 CDD:320132 81/378 (21%)
TM helix 1 75..99 CDD:320132 7/21 (33%)
TM helix 2 108..130 CDD:320132 6/21 (29%)
TM helix 3 146..168 CDD:320132 3/21 (14%)
TM helix 4 191..207 CDD:320132 6/19 (32%)
TM helix 5 245..268 CDD:320132 5/22 (23%)
TM helix 6 340..365 CDD:320132 9/36 (25%)
TM helix 7 382..407 CDD:320132 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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