DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and Htr1a

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_032334.2 Gene:Htr1a / 15550 MGIID:96273 Length:421 Species:Mus musculus


Alignment Length:445 Identity:136/445 - (30%)
Similarity:211/445 - (47%) Gaps:91/445 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 LGTATPATHELNATQPFGGSGLNFNESGAGLSDHHHHQQHNPDEDWLDNIVWVFKAFVMLL---I 163
            ||.....|..|   :|||..|   |::|                  |.|:.:.::....||   :
Mouse     6 LGQGNNTTTSL---EPFGTGG---NDTG------------------LSNVTFSYQVITSLLLGTL 46

  Fly   164 IIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNFSPFLCDL 228
            |..|:.||..|:.::...|.|:.:.||.:.|||:.|:||:::.:......||..:|......|||
Mouse    47 IFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKWTLGQVTCDL 111

  Fly   229 WNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWISPALLSFLPIFIGW 293
            :.:|||...|:||||||.|::|||:||..|:.|....|.|....::..||:...|:| :|..:||
Mouse   112 FIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISLTWLIGFLIS-IPPMLGW 175

  Fly   294 YTTPQHQQFVIQNPTQCSFVVNKYYAVISSSISFWIPCTIMIFTYLAIFREAN---RQEKQLMMR 355
             .||:.:    .||.:|:...:..|.:.|:..:|:||..:|:..|..|||.|.   |:..:.:.:
Mouse   176 -RTPEDR----SNPNECTISKDHGYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRKTVKKVEK 235

  Fly   356 HGNAMLMHRPSMQPSGEALSGSGSS------------------------------KTLTLHEV-- 388
            .|........|..|..::|:|...|                              :.:.:|.|  
Mouse   236 KGAGTSFGTSSAPPPKKSLNGQPGSGDCRRSAENRAVGTPCANGAVRQGEDDATLEVIEVHRVGN 300

  Fly   389 EQEHTP----------------------TKDKHLIKMKREHKAARTLGIIMGTFILCWLPFFLWY 431
            .:.|.|                      .:.|..:.:.||.|..:|||||||||||||||||:..
Mouse   301 SKGHLPLPSESGATSYVPACLERKNERTAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVA 365

  Fly   432 TLSMTCE-ECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFREAFRNTLLCLFC 485
            .:...|| .|.:|:::.:|:.|:||.||.|||:||||||:||:.||:..:.|.||
Mouse   366 LVLPFCESSCHMPELLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFC 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 60/177 (34%)
7tm_1 170..465 CDD:278431 107/352 (30%)
Htr1aNP_032334.2 7tm_4 48..>169 CDD:304433 44/121 (36%)
7tm_1 53..400 CDD:278431 107/352 (30%)
Agonist binding. /evidence=ECO:0000250 112..121 3/8 (38%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250 133..135 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 237..268 6/30 (20%)
Agonist binding. /evidence=ECO:0000250 358..362 3/3 (100%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250 396..400 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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