DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and Adrb1

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_031445.2 Gene:Adrb1 / 11554 MGIID:87937 Length:466 Species:Mus musculus


Alignment Length:414 Identity:145/414 - (35%)
Similarity:216/414 - (52%) Gaps:53/414 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 ATGSSSASNSSTGGIALPLGTATPATHELNATQPFGGSGL-NFNESGAGLSDHHHHQQHNPDEDW 147
            |.|:|...|.|:.. .||.|.||.|...:.|:.|  .|.| ..:|..|.||           :.|
Mouse     7 ALGASEPCNLSSAA-PLPDGAATAARLLVLASPP--ASLLPPASEGSAPLS-----------QQW 57

  Fly   148 LDNIVWVFKAFVMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFS 212
            ...:     ..::.||::..:.||:|||:::.:..:|:.:||.|::|||.||:::.::.:.|..:
Mouse    58 TAGM-----GLLLALIVLLIVVGNVLVIVAIAKTPRLQTLTNLFIMSLASADLVMGLLVVPFGAT 117

  Fly   213 VQVTGRWNFSPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNT 277
            :.|.|||.:..|.|:||.|:||...||||..||.|::|||.||..|.:|...:|:.....::...
Mouse   118 IVVWGRWEYGSFFCELWTSVDVLCVTASIETLCVIALDRYLAITSPFRYQSLLTRARARALVCTV 182

  Fly   278 WISPALLSFLPIFIGWYTTPQHQ-QFVIQNPTQCSFVVNKYYAVISSSISFWIPCTIMIFTYLAI 341
            |...||:|||||.:.|:.....: :....:|..|.||.|:.||:.||.:||::|..||.|.||.:
Mouse   183 WAISALVSFLPILMHWWRAESDEARRCYNDPKCCDFVTNRAYAIASSVVSFYVPLCIMAFVYLRV 247

  Fly   342 FREANRQEKQL-----MMRHGNAMLMHRPSMQPS--------GEALSGSGSSKTLTLHEVEQEHT 393
            ||||.:|.|::     ....|.|   ..||.:||        .::|:...|||            
Mouse   248 FREAQKQVKKIDSCERRFLGGPA---RPPSPEPSPSPGPPRPADSLANGRSSK------------ 297

  Fly   394 PTKDKHLIKMKREHKAARTLGIIMGTFILCWLPFFLWYTLSMTCEECQVPDIVVSILFWIGYFNS 458
             .:...|:.: ||.||.:|||||||.|.||||||||...:.....:. |||.:.....|:||.||
Mouse   298 -RRPSRLVAL-REQKALKTLGIIMGVFTLCWLPFFLANVVKAFHRDL-VPDRLFVFFNWLGYANS 359

  Fly   459 TLNPLIYAYFNRDFREAFRNTLLC 482
            ..||:||.. :.|||:||:..|.|
Mouse   360 AFNPIIYCR-SPDFRKAFQRLLCC 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 67/178 (38%)
7tm_1 170..465 CDD:278431 114/308 (37%)
Adrb1NP_031445.2 7tmA_Beta1_AR 59..376 CDD:320624 121/340 (36%)
TM helix 1 60..86 CDD:320624 7/30 (23%)
TM helix 2 93..120 CDD:320624 9/26 (35%)
TM helix 3 131..161 CDD:320624 17/29 (59%)
TM helix 4 175..193 CDD:320624 5/17 (29%)
TM helix 5 221..253 CDD:320624 17/31 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 264..302 10/53 (19%)
TM helix 6 306..336 CDD:320624 20/30 (67%)
TM helix 7 345..370 CDD:320624 10/25 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..466
PDZ-Binding. /evidence=ECO:0000250 463..466
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D328277at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8780
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24248
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X822
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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