DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Octbeta2R and Adra2b

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_033763.3 Gene:Adra2b / 11552 MGIID:87935 Length:448 Species:Mus musculus


Alignment Length:440 Identity:125/440 - (28%)
Similarity:184/440 - (41%) Gaps:120/440 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 AFVMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNF 221
            |..:..:|:..|.||.|||::|:..|.||...|.|:||||.|||:||.:.:.|:.:.::.|.|.|
Mouse    16 ASAITFLILFTIFGNALVILAVLTSRSLRAPQNLFLVSLAAADILVATLIIPFSLANELLGYWYF 80

  Fly   222 SPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWISPALLSF 286
            ....|:::.:|||.|.|:||:|||.||:|||:|:.:.|:|....|.|.:..::|..|:..|::|.
Mouse    81 WRAWCEVYLALDVLFCTSSIVHLCAISLDRYWAVSRALEYNSKRTPRRIKCIILTVWLIAAVISL 145

  Fly   287 LPIFIGWYTTPQHQQFVIQNPTQCSFVVNKYYAVISSSISFWIPCTIMIFTYLAIFREANRQE-K 350
            .|:.......|:....     .||......:|.:.||..||:.||.|||..||.|:..|.|.. :
Mouse   146 PPLIYKGDQRPEPHGL-----PQCELNQEAWYILASSIGSFFAPCLIMILVYLRIYVIAKRSHCR 205

  Fly   351 QLMMRHGNAMLMHRPSMQPSGEALSGSGSSKTLTL-----------------HEVEQEHTP---- 394
            .|..:.|:.   ...|.:|...|.....|:|..||                 .|.|:..||    
Mouse   206 GLGAKRGSG---EGESKKPHPAAGGVPASAKVPTLVSPLSSVGEANGHPKPPREKEEGETPEDPE 267

  Fly   395 -------------------------TKDK------------------------------------ 398
                                     |.:|                                    
Mouse   268 ARALPPNWSALPRSVQDQKKGTSGATAEKGAEEDEEEVEECEPQTLPASPASVFNPPLQQPQTSR 332

  Fly   399 ------------------------HLIKMKREHKAARTLGIIMGTFILCWLPFFLWYTLSMTC-E 438
                                    ...::.||.:....|.:::|.|::||.|||..|:|...| :
Mouse   333 VLATLRGQVLLSKNVGVASGQWWRRRTQLSREKRFTFVLAVVIGVFVVCWFPFFFSYSLGAICPQ 397

  Fly   439 ECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFREAFRNTLLCLFCNWW 488
            .|:||..:....|||||.||:|||:||..||:|||.|||..|    |..|
Mouse   398 HCKVPHGLFQFFFWIGYCNSSLNPVIYTIFNQDFRRAFRRIL----CRQW 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 67/177 (38%)
7tm_1 170..465 CDD:278431 109/402 (27%)
Adra2bNP_033763.3 7tmA_alpha2B_AR 7..435 CDD:320444 119/426 (28%)
TM helix 1 14..40 CDD:320444 9/23 (39%)
TM helix 2 47..73 CDD:320444 12/25 (48%)
TM helix 3 85..115 CDD:320444 17/29 (59%)
TM helix 4 127..150 CDD:320444 6/22 (27%)
TM helix 5 169..198 CDD:320444 13/28 (46%)
PRK12323 <209..354 CDD:237057 14/147 (10%)
TM helix 6 362..392 CDD:320444 11/29 (38%)
TM helix 7 403..428 CDD:320444 12/24 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.