DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and LOC105946838

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_017947772.1 Gene:LOC105946838 / 105946838 -ID:- Length:352 Species:Xenopus tropicalis


Alignment Length:348 Identity:69/348 - (19%)
Similarity:140/348 - (40%) Gaps:101/348 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 FVMLLIIIA---AICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRW 219
            |:.:|..:|   .:.||:|||..::..:|||..|:.::.::|::|::. ::::.| .:..:...|
 Frog    34 FLPVLYCLAFTFGLVGNILVIFVLVYCKKLRTTTDVYLFNMAVSDLLF-VVSLPF-IAYTIINEW 96

  Fly   220 NFSPFLCDLWNSLDVYF--STASILHLCCISVDRYYAIVKPLKYPISMTKRVVG---IMLLNTWI 279
            .|...:|.:.::  :||  ..:||..:..:|||||:|||..:   .::..|.|.   |:.:..|:
 Frog    97 IFGNIMCKILST--IYFVGFFSSIFFITVMSVDRYFAIVHVV---FALRVRNVRWGLIVSIVVWV 156

  Fly   280 SPALLSFLPIFIGWYTTPQ---HQQFVIQNPTQCSF---VVNK-----YYAVISSSISFWIPCTI 333
            ....:|          ||.   |:..:..|.|:|..   .:|:     :.:::.:.....||..|
 Frog   157 LALSIS----------TPNFKFHEIVMTGNYTECVLSYPEINRQNWKIFCSLLINIFGLVIPLFI 211

  Fly   334 MIFTYLAIFREANRQEKQLMMRHGNAMLMHRPSMQPSGEALSGSGSSKTLTLHEVEQEHTPTKDK 398
            ::|:||.|.:                      ::|.|                            
 Frog   212 LLFSYLHIIK----------------------TLQNS---------------------------- 226

  Fly   399 HLIKMKREHKAARTLGIIMGTFILCWLPFFLWYTLS---------MTCEECQVPDIVVSILFWIG 454
               |.|::..|.|.:.|:...|.:.|.|:.:...|:         :..::.|.   ...:...:.
 Frog   227 ---KCKQKRCAIRLILIVGIVFFIFWTPYNIVVFLNILKTSGAVDLETDQLQT---AADVTHTLS 285

  Fly   455 YFNSTLNPLIYAYFNRDFREAFR 477
            ..:..|||:||.:....||...|
 Frog   286 LVHCCLNPIIYTFAGEKFRGYLR 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 46/196 (23%)
7tm_1 170..465 CDD:278431 61/319 (19%)
LOC105946838XP_017947772.1 7tmA_Chemokine_R 33..307 CDD:341319 68/345 (20%)
TM helix 1 33..60 CDD:341319 8/25 (32%)
TM helix 2 67..92 CDD:341319 4/26 (15%)
TM helix 3 103..133 CDD:341319 11/31 (35%)
TM helix 4 147..167 CDD:341319 5/29 (17%)
TM helix 5 193..222 CDD:341319 7/50 (14%)
TM helix 6 229..259 CDD:341319 7/29 (24%)
TM helix 7 275..300 CDD:341319 6/27 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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