DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and LOC100498398

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_002931741.2 Gene:LOC100498398 / 100498398 -ID:- Length:456 Species:Xenopus tropicalis


Alignment Length:429 Identity:115/429 - (26%)
Similarity:193/429 - (44%) Gaps:89/429 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 NESGAGLSDH--HHHQQHNPDEDWLDNIVWVFKAFVMLLIIIAAICGNLLVIISVMRVRKLRVIT 188
            |...|||::.  .|:.|       ..:.|.:..|.:|.|:::|.:.||.|||::.:..:.||...
 Frog    33 NACAAGLAEEQLQHYGQ-------FSSSVSIILAVLMALMVLATVLGNALVILAFVVEKGLRTQG 90

  Fly   189 NYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNFSPFLCDLWNSLDVYFSTASILHLCCISVDRYY 253
            |:|.::||:||.:|....:.......:||:|.|...||.||..:|....|||:.::..||.||:.
 Frog    91 NFFFLNLAIADFLVGGFCIPLYIPYVLTGQWKFGKGLCKLWLVMDYLLCTASVFNIVLISYDRFI 155

  Fly   254 AIVKPLKYPI--SMTKRVVGIMLLNTWISPALLSFLPIFIGW----YTT--PQHQQFVIQNPTQC 310
            ::.|.:.|..  .||:..| :.:|..|:: |.|.:.|..|.|    .||  |:.:.:|       
 Frog   156 SVTKAVSYRAQKGMTRNAV-LKMLIVWVA-AFLLYGPAIITWEYIARTTILPEGECYV------- 211

  Fly   311 SFVVNKYYAVISSSISFWIPCTIMIFTYLAIF-----REANRQEKQLM-----------MRHGNA 359
            .|..|.|:.:|:|:|.|:.|...:.:..|:|:     |...|.|:...           .|..:.
 Frog   212 EFYYNWYFLMIASTIEFFTPFISVTYFNLSIYINIKRRTMMRNEEMAQGQEHCELTFQGKRKEHL 276

  Fly   360 MLMHRPSMQPSGEA------LS-------GSGS----SKTLTLH--------EVEQEHTPTKD-- 397
            :...:|:.:|.|||      ||       |:|:    |..|.|:        :||.....::|  
 Frog   277 IFFVKPADRPYGEAKKQGGTLSPAMPSAVGNGAQELESPMLDLNINQDLPPLQVEVSAKKSQDCF 341

  Fly   398 -------------------KHLIKMKREHKAARTLGIIMGTFILCWLPFFLWYTLSMTCEECQVP 443
                               .:..::.|:.:.|::|.||:..|.|||.|:.|...:...|....|.
 Frog   342 YKSAENACSNMRPDMASSIANRFRLSRDKRVAKSLAIIVCVFGLCWAPYTLLMIIRAACHGRCVQ 406

  Fly   444 DIVVSILFWIGYFNSTLNPLIYAYFNRDFREAFRNTLLC 482
            |.:..|.||:.:.||.:||::|...:..||:||.. |||
 Frog   407 DYLYEISFWLLWLNSAINPVLYPLCHMSFRKAFMK-LLC 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 56/185 (30%)
7tm_1 170..465 CDD:278431 96/364 (26%)
LOC100498398XP_002931741.2 7tmA_Histamine_H3R 56..439 CDD:320423 103/391 (26%)
TM helix 1 57..83 CDD:320423 9/25 (36%)
TM helix 2 90..117 CDD:320423 7/26 (27%)
TM helix 3 128..158 CDD:320423 11/29 (38%)
TM helix 4 173..191 CDD:320423 5/19 (26%)
TM helix 5 216..246 CDD:320423 9/29 (31%)
TM helix 6 367..397 CDD:320423 11/29 (38%)
TM helix 7 407..432 CDD:320423 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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