DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and adra1d

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_002935531.2 Gene:adra1d / 100495969 XenbaseID:XB-GENE-6050827 Length:500 Species:Xenopus tropicalis


Alignment Length:476 Identity:136/476 - (28%)
Similarity:230/476 - (48%) Gaps:67/476 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 VMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNFSP 223
            |:.:.|:.||.||::||:||...|:|:.:||||:|:||:||::::...:.|:.:::|.|.|.|..
 Frog    48 VLAVFILFAIVGNIMVILSVACNRQLQTVTNYFIVNLAIADLLLSTTVLPFSATLEVLGFWAFGR 112

  Fly   224 FLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWISPALLSFLP 288
            ..||:|.::||...||||:.||.||:|||..:...||||..||::...::|:..|:|..::|..|
 Frog   113 VFCDIWAAVDVLCCTASIMSLCVISIDRYVGVKYSLKYPTIMTEKKAVVILILLWLSSMVISIGP 177

  Fly   289 IFIGWYTTPQHQQFVIQNPTQCSFVVNKYYAVISSSISFWIPCTIMIFTYLAIFREANRQEKQLM 353
            : :||...|.      .:.::||......||:.||..||::|..:::..|..::..|.|..|.| 
 Frog   178 L-LGWKEPPP------PDDSKCSITEEPGYALFSSLFSFYLPLLVILVMYFRVYIVARRTTKSL- 234

  Fly   354 MRHGNAMLMHRPSMQPSGEALSGSGSSKTLTLH--EVEQEHTPTKDKH------------LIKMK 404
              ..........||:            ..|.:|  .|.:|.:.:...|            |:|..
 Frog   235 --EAGVKKERNKSME------------VVLRIHCRSVLEESSSSTRNHKGHTFRSSLSVRLLKFS 285

  Fly   405 REHKAARTLGIIMGTFILCWLPFFLWYTLSMTCEECQVPDIVVSILFWIGYFNSTLNPLIYAYFN 469
            ||.|||:||.|::|.||||||||||...|.......:..|.|..::||:|||||.:||:||...:
 Frog   286 REKKAAKTLAIVVGVFILCWLPFFLILPLGSFFPALKPTDSVFKVIFWLGYFNSCVNPIIYPCSS 350

  Fly   470 RDFREAFRNTLLCLFCNWWKDRHLPL----DIDIRRSSLRYDQRAKSVYSESY--LNST---TPS 525
            ::|:.||...|.|. |   :.|..|:    |...|.|.....:.:...:..::  :||:   .|.
 Frog   351 KEFKRAFIRILKCQ-C---RRRRRPIWRVYDHQWRTSMTSSGRGSDGEHHPNFTPINSSFIFNPG 411

  Fly   526 HRRQSQMVDNLXYRDEALLTPIAQQQQRLAAGGSRLGGQLAAAAKDGRESKDAKDTGKDAGKGKS 590
            :...:....|. :|....::|..:...:|                  :|..::......:|..:|
 Frog   412 NHGIAGKRKNTDFRRWKFISPFQRPSSQL------------------KEKMNSLSHKIRSGSNRS 458

  Fly   591 NVDCLAGDDVQEIQIEIPMEY 611
            |.......:|:.|.:.:..::
 Frog   459 NSSAAYKSEVESISMAVSNDF 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 65/177 (37%)
7tm_1 170..465 CDD:278431 106/308 (34%)
adra1dXP_002935531.2 7tmA_alpha1D_AR 43..357 CDD:320450 113/330 (34%)
TM helix 1 44..70 CDD:320450 10/21 (48%)
TM helix 2 77..103 CDD:320450 10/25 (40%)
TM helix 3 115..145 CDD:320450 16/29 (55%)
TM helix 4 157..180 CDD:320450 5/23 (22%)
TM helix 5 197..226 CDD:320450 8/28 (29%)
TM helix 6 285..315 CDD:320450 19/29 (66%)
TM helix 7 325..350 CDD:320450 13/24 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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