DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and ptgdr

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_031747558.1 Gene:ptgdr / 100494338 XenbaseID:XB-GENE-989130 Length:338 Species:Xenopus tropicalis


Alignment Length:331 Identity:69/331 - (20%)
Similarity:119/331 - (35%) Gaps:81/331 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 LIIIAAICGNLLVIISVMRVRKLR--------VITNYFVVSLAMADIMVAIMAMTFNFS----VQ 214
            |:..|...|||:.:. ::.:.||.        |:.....|:..|...::..:.....|.    |.
 Frog    24 LLFAAGFLGNLIALF-ILWLHKLHAKKTSVFYVLVTVLTVTNLMGKCLLCPVVQVAYFQNQSLVG 87

  Fly   215 VTGRWNFSPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWI 279
            :||..|    ||.::..|.::...|....|..::||.:.|:..|..|..::.|::..::.|..::
 Frog    88 MTGNLN----LCKVFGFLMIFCGLAPTFILLAMAVDCWLALGYPFFYQENINKKLALLVSLILYV 148

  Fly   280 SPALLSFLPIF-IGWYT-----TPQHQQFVIQNPTQCSFVVNKYYAVISSSISFWIP-CTIMIFT 337
            .......||.| .|.|.     |....|...:..:..:...:..|..|...:...|. |.:||..
 Frog   149 FCLGFCCLPFFGFGRYKQYCPGTWCFIQMTAEESSTSALAYSMLYGTIMGLLILAIVFCNLMIMK 213

  Fly   338 YL-AIFREANRQEKQLMMRHGNAMLMHRPS------MQPSGEALSGSGSSKTLTLHEVEQEHTPT 395
            .| .:::..|  ||.:            ||      .:|:|             :.|:|      
 Frog   214 NLYQMYKREN--EKGI------------PSANFPNQQEPAG-------------MEELE------ 245

  Fly   396 KDKHLIKMKREHKAARTLGIIMGTFILCWLPFFL-WYTLSMTCEECQVPDIVVSILFWIGYFNST 459
               |||          .|.|:...|..|..|... .|..:...|:.:..|:.|..|..:   |||
 Frog   246 ---HLI----------LLAIMTVLFAACSFPLTARVYVGAFKGEKNEYADLTVLRLLSV---NST 294

  Fly   460 LNPLIY 465
            |:|.|:
 Frog   295 LDPWIF 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 40/197 (20%)
7tm_1 170..465 CDD:278431 66/321 (21%)
ptgdrXP_031747558.1 7tmA_PGD2 16..312 CDD:320268 69/331 (21%)
TM helix 1 18..42 CDD:320268 5/18 (28%)
TM helix 2 54..76 CDD:320268 3/21 (14%)
TM helix 3 96..118 CDD:320268 3/21 (14%)
TM helix 4 141..157 CDD:320268 1/15 (7%)
TM helix 5 186..209 CDD:320268 4/22 (18%)
TM helix 6 247..269 CDD:320268 7/31 (23%)
TM helix 7 279..304 CDD:320268 9/25 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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