DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and adra1a

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_002933012.2 Gene:adra1a / 100492776 XenbaseID:XB-GENE-6048410 Length:489 Species:Xenopus tropicalis


Alignment Length:433 Identity:134/433 - (30%)
Similarity:213/433 - (49%) Gaps:86/433 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 LNATQPFGGSGLNFNESGAGLSDHHHHQQHNPDEDWLDNIVWVFKAFVMLLI----IIAAICGNL 172
            ||.|.|  |:.:|                             :.||.|:.:|    |...:.||:
 Frog    36 LNCTHP--GATIN-----------------------------ISKAIVVGVIFGVFITFGVLGNI 69

  Fly   173 LVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNFSPFLCDLWNSLDVYFS 237
            |||:||...|.|:.:|:||:.:||:||:::..|.:.|:.:.::.|.|.|....|::|.::||...
 Frog    70 LVILSVACHRHLQTVTHYFIANLAVADLLLMSMVLPFSATFEIQGYWLFGRIFCNIWAAVDVLCC 134

  Fly   238 TASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWISPALLSFLPIFIGWYTTPQHQQF 302
            ||||:.||.||:|||..:..||:||..||::...:.||..|:...::|..|:| ||      :|.
 Frog   135 TASIMSLCAISIDRYIGVSYPLRYPSIMTEKRGVLALLCIWVLSLVISIGPLF-GW------KQP 192

  Fly   303 VIQNPTQCSFVVNKYYAVISSSISFWIPCTIMIFTYLAIFREANRQEKQL----MMRHGNA---- 359
            ..::...|.......||:.|:..||::|.:|::..|..::..|.|:.|.|    .:...::    
 Frog   193 APEDDKICEITKEPGYALFSAFGSFYLPLSIILVMYFRVYIVAKRESKVLTSGMKLEKSDSEEVT 257

  Fly   360 MLMHRPSMQPSGEALSGSGSSKTLTLHEVEQEHTPTKDKHLIKMKREHKAARTLGIIMGTFILCW 424
            :.:||.|   :.|::..:.|||..|...|          .|:|..||.|||:||||::|.|:|||
 Frog   258 LRIHRKS---TPESIGSTSSSKQKTQFSV----------RLLKFSREKKAAKTLGIVVGCFVLCW 309

  Fly   425 LPFFLWYTLSMTCEECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFREAFRNTLLCLFCNWWK 489
            |||||...:..........|.:..|.||:|||||.:||:||...:.:||:||:|.|         
 Frog   310 LPFFLVMPIGSIYPPANSSDTIFKITFWLGYFNSCINPVIYPCSSPEFRKAFQNIL--------- 365

  Fly   490 DRHLPLDIDIRRSSLRYDQRAKSVYSESY-LNSTTPSHRRQSQ 531
                       .:...:.::|.|.||..: |||  |.||...:
 Frog   366 -----------HARCSHRRQAASKYSSGFLLNS--PVHRSSEE 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 61/177 (34%)
7tm_1 170..465 CDD:278431 105/302 (35%)
adra1aXP_002933012.2 7tmA_alpha1A_AR 51..361 CDD:320448 112/329 (34%)
TM helix 1 52..78 CDD:320448 10/25 (40%)
TM helix 2 85..111 CDD:320448 9/25 (36%)
TM helix 3 123..153 CDD:320448 15/29 (52%)
TM helix 4 165..188 CDD:320448 6/23 (26%)
TM helix 5 205..234 CDD:320448 8/28 (29%)
TM helix 6 289..319 CDD:320448 19/29 (66%)
TM helix 7 329..354 CDD:320448 13/24 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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