DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and LOC100490372

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_002937327.2 Gene:LOC100490372 / 100490372 -ID:- Length:405 Species:Xenopus tropicalis


Alignment Length:344 Identity:117/344 - (34%)
Similarity:187/344 - (54%) Gaps:46/344 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 VMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNFSP 223
            ::.:|.:....||.:|.|..:..::||.:|..|::||||||::||.:.|.|:...:|||.|.|..
 Frog    61 LLTVIDLITFLGNAVVFICPVVEKRLRTVTYMFIMSLAMADLLVACLVMPFSIIYEVTGMWLFGK 125

  Fly   224 FLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWISPALLSFLP 288
            ..|.:|.|.||.|.||||:.||.||:|||.::|.|..|...|::|...||.:..|:..:|:||||
 Frog   126 QFCKVWISFDVMFCTASIVTLCFISLDRYCSVVTPYHYSKRMSRRRCIIMTVTIWVYSSLISFLP 190

  Fly   289 IFIGWYTTPQHQQFVIQNPTQCSFVVNKYYAVISSSISFWIPCTIMIFTYLAIFREANRQEKQLM 353
            :..||...|...   ..|..||.||.|..:|:::||::|:||..||...|..|:|.:..:..:::
 Frog   191 VMQGWNEIPGVD---TDNGKQCIFVTNWTFAIVASSLAFYIPFIIMCSMYFFIYRASRLKATRIV 252

  Fly   354 MRHGNAMLMHRPSMQPSGEALSGSGSSKTLTLHEVEQEHTPTKDKHLIKMKREHKAARTLGIIMG 418
                                      |:||.||    .|..:|.::.:::  |:||.||:|||:.
 Frog   253 --------------------------SQTLDLH----YHPNSKRQNNLQL--ENKATRTMGIIIS 285

  Fly   419 TFILCWLPFFLWYTLSMTCEECQVPDIVVS---ILFWIGYFNSTLNPLIYAYFNRDFREAFRNTL 480
            .|::||||:|:...|...........::|:   .:.|:||.|||:||::||:.||||:.|.:..|
 Frog   286 VFVMCWLPYFVLNVLIAAKGTDSTSRVLVNAFKFITWLGYCNSTINPMLYAFLNRDFQRALKKLL 350

  Fly   481 LCLFCNWWKDRHLPLDIDI 499
            :   |..|:.:     :||
 Frog   351 I---CRRWRSQ-----VDI 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 71/177 (40%)
7tm_1 170..465 CDD:278431 104/297 (35%)
LOC100490372XP_002937327.2 7tmA_amine_R-like 58..346 CDD:320098 111/319 (35%)
TM helix 1 58..83 CDD:320098 5/21 (24%)
TM helix 2 90..117 CDD:320098 12/26 (46%)
TM helix 3 128..158 CDD:320098 17/29 (59%)
TM helix 4 170..190 CDD:320098 7/19 (37%)
TM helix 5 214..270 CDD:320098 19/85 (22%)
TM helix 6 271..301 CDD:320098 14/31 (45%)
TM helix 7 311..339 CDD:320098 11/27 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D328277at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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