DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Octbeta2R and ptgir

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_002932677.1 Gene:ptgir / 100490183 XenbaseID:XB-GENE-982059 Length:383 Species:Xenopus tropicalis


Alignment Length:437 Identity:96/437 - (21%)
Similarity:157/437 - (35%) Gaps:123/437 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 VMLLIIIAAICGNLLV--IISVMRVRKLRVITNYF---VVSLAMADIM--VAIMAMTF-----NF 211
            |..|:....:.||||.  |:.|.| |:.|...:.|   |..||:.|::  ..:..|.|     ..
 Frog    19 VSTLMFAGGVVGNLLALGILGVHR-RERRARASPFWVLVTGLAVTDLLGTCILSPMVFVSYAQQS 82

  Fly   212 SVQVTGRWNFSPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKY-PISMTKRVVGIMLL 275
            |:...|.   :| ||.|:.....:||.||::.|.|::::|..||..|..| ..|...|:....:.
 Frog    83 SILALGA---AP-LCHLFAFAMTFFSLASMMLLFCMALERCLAISHPYVYAQHSWGHRLAHAAIP 143

  Fly   276 NTWISPALLSFLPIF-IG---------W----YTTPQHQQFVIQNPTQCSFVVNKYYAVISSSIS 326
            .:::..|||..||:. :|         |    .|.|.|::       ..:...:..||.::..:.
 Frog   144 VSYVLGALLCALPLVGVGEHKQYCPGTWCFIRMTVPGHRE-------SGALAFSLLYASLTGLLI 201

  Fly   327 FWIP-CTIMIFTYLAIFREANRQEKQLMMRHGNAMLMHRPSMQPSGEALSGSGSSKTLTLHEVEQ 390
            ..|. |...:...|...|:..:..:..:.|.|            :...|.|:|        |.|.
 Frog   202 VAIVICNTSVTASLCRMRKGQKARRGSLRRCG------------ARGWLLGAG--------EEEL 246

  Fly   391 EHTPTKDKHLIKMKREHKAARTLGIIMGTFILCWLPFFLWYTLSMTCE-ECQVPDIVVSILFWIG 454
            |       |||          .|.::...|::|.:|..|...|....| :.:..|:   :.|...
 Frog   247 E-------HLI----------LLVLMTVIFMVCTVPLTLRAFLGAIYEDDNESADL---LAFRFS 291

  Fly   455 YFNSTLNPLIYAYFNRDFREAFRNTLLCLFCNWWKDRHLPLDIDIRRSSLRYDQRAKSVYSESYL 519
            .||..|:|.|:..|.   ...||. |..|.|:.|...:.|..:                  .|:|
 Frog   292 AFNPILDPWIFIIFR---GSVFRK-LRSLLCSGWSHTNKPTSV------------------TSFL 334

  Fly   520 NSTTPSH-RRQSQMV-------------------DNLXYRDEALLTP 546
            ..::|.. .|..::|                   :.. .|:.|||.|
 Frog   335 EPSSPGFIPRSPELVPVGDTCCAGNLKKERDSEREGTGEREAALLPP 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 50/205 (24%)
7tm_1 170..465 CDD:278431 75/323 (23%)
ptgirXP_002932677.1 7tm_1 30..301 CDD:278431 75/322 (23%)
7tm_4 <94..>231 CDD:304433 30/143 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.