DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and gpr27

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_012817202.1 Gene:gpr27 / 100485839 XenbaseID:XB-GENE-978905 Length:370 Species:Xenopus tropicalis


Alignment Length:360 Identity:76/360 - (21%)
Similarity:146/360 - (40%) Gaps:30/360 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 VWVFKAFVMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNF-SVQV 215
            |.|.|...:.:|...::.||||.....::.:.|.....|.::.|.:.|::.:::...... |:..
 Frog    21 VSVAKLASLGIIACVSLAGNLLFAFIALKDKNLHRAPYYLMLDLCVGDLIRSLLCFPLVLKSISS 85

  Fly   216 TGRWNFSPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWIS 280
            ..:|.:|...|.:.....|.....:...|..||:.||.||.....|...||.....|::...||.
 Frog    86 GSQWTYSKRSCRIMAFGAVLLCFHAAFMLLSISLTRYMAIAHHRFYCKRMTGWACAIVISMAWIL 150

  Fly   281 PALLSFLPIF-IGWYTTPQHQQFVIQNPTQCSFVVNKYYAVISS-----SISFWIPCTIMIFTYL 339
            ...::..|:| :|.|.       .|:...||:| .::|.....|     .::|.:..|..|:..|
 Frog   151 STAMALPPVFEVGTYK-------FIREEDQCTF-EHRYVKANDSLGFLLMLAFIVGATHFIYMKL 207

  Fly   340 AIFREANRQEK--QLMMRHGNAMLMHRPSM--QPSGEALSGSGSSKT----LTLHEVEQEHTPTK 396
            ..|...:|:.|  ||..........|.|..  |.:...::|.|...|    :.:.:..|.|.   
 Frog   208 LFFIYDHRKMKPAQLTPAISQNWSFHGPGAAGQAAANWIAGFGRGPTPPTLVGMRQSTQGHI--- 269

  Fly   397 DKHLI---KMKREHKAARTLGIIMGTFILCWLPFFLWYTLSMTCEECQVPDIVVSILFWIGYFNS 458
             |.|:   :.|:|.:..:...:|...|::.|.|:.|...|.:..:...:|...::...|:.:..:
 Frog   270 -KRLVVLEEFKQEKRLCKMFYVITFLFLVFWAPYLLACYLRVFLKASSLPQGYLTTAVWLTFAQA 333

  Fly   459 TLNPLIYAYFNRDFREAFRNTLLCLFCNWWKDRHL 493
            .:||::....|::.|.:.|..:.|......:|.::
 Frog   334 GVNPIVCLLLNKEVRMSLRAYIPCKSTQTQRDPYM 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 40/184 (22%)
7tm_1 170..465 CDD:278431 67/312 (21%)
gpr27XP_012817202.1 7tmA_SREB-like 25..351 CDD:320134 71/337 (21%)
TM helix 1 25..50 CDD:320134 6/24 (25%)
TM helix 2 57..82 CDD:320134 3/24 (13%)
TM helix 3 96..126 CDD:320134 8/29 (28%)
TM helix 4 140..160 CDD:320134 4/19 (21%)
TM helix 5 181..210 CDD:320134 5/28 (18%)
TM helix 6 279..309 CDD:320134 7/29 (24%)
TM helix 7 319..344 CDD:320134 3/24 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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