DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and taar20u

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_021328040.1 Gene:taar20u / 100151047 ZFINID:ZDB-GENE-060414-17 Length:357 Species:Danio rerio


Alignment Length:334 Identity:98/334 - (29%)
Similarity:164/334 - (49%) Gaps:56/334 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 IVWVFKAFVMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQV 215
            |::||.:.:....:..    |||||||:...:||...||..::|||:.|:::.:: |.......:
Zfish    58 IIYVFVSLLSAWTVFL----NLLVIISISHFKKLHTPTNMIILSLAVTDLLIGLI-MPVEAIRLI 117

  Fly   216 TGRWNFSPFLCDLW-NSLDVYFSTASILHLCCISVDRYYAIVKPLKYP--ISMTKRVVGIMLLNT 277
            ...|.|....|:|: ..:|:..|| |:.:|..|:||||.|:..||.||  |::||.::.|.|  .
Zfish   118 ETCWYFGDTFCELYLLFVDLLIST-SLSNLVLIAVDRYVAVCHPLLYPQKITITKTLMSICL--G 179

  Fly   278 W-ISPALLSFLPIFIGWYTTPQHQQFVIQNPTQCSFVVNKYYAVISSSISFWIPCTIMIFTYLAI 341
            | .|.|.:..:.|...::.| .|:..|...  :|..:::..:.|....:||..||.::|..||.|
Zfish   180 WACSSAYIIAIAINNRYFDT-SHRTDVCYG--ECLAIISFNWTVTDLFMSFIFPCFVIIMLYLRI 241

  Fly   342 FREANRQEKQLMMRHGNAMLMHRPSMQPSGEALSGSGSSKTLTLHEVEQEHTPTKDKHLIKMKRE 406
            |...::|.|.:     |:::       ..|:.:: .||                     :|.|.|
Zfish   242 FYVVHQQVKVI-----NSLI-------KGGKCVT-EGS---------------------VKRKSE 272

  Fly   407 HKAARTLGIIMGTFILCWLPFFLWYTLSMTCEECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRD 471
            .|||.|||||:..::|||:|:::       |....:....::.|.|:.|.||.||||:||.|...
Zfish   273 SKAALTLGIIVTVYLLCWIPYYI-------CSLTVMTSTALNALLWVVYANSGLNPLVYALFYPW 330

  Fly   472 FREAFRNTL 480
            |::..:.||
Zfish   331 FKKTAQLTL 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 56/181 (31%)
7tm_1 170..465 CDD:278431 89/298 (30%)
taar20uXP_021328040.1 7tmA_TAARs 57..334 CDD:320183 96/327 (29%)
TM helix 1 58..84 CDD:320183 10/29 (34%)
TM helix 2 91..116 CDD:320183 7/25 (28%)
TM helix 3 128..158 CDD:320183 13/30 (43%)
TM helix 4 170..193 CDD:320183 7/24 (29%)
TM helix 5 215..244 CDD:320183 10/28 (36%)
TM helix 6 270..300 CDD:320183 15/36 (42%)
TM helix 7 303..328 CDD:320183 11/24 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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