DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and taar20u

DIOPT Version :10

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_001920823.4 Gene:taar20u / 100151047 ZFINID:ZDB-GENE-060414-17 Length:350 Species:Danio rerio


Alignment Length:327 Identity:95/327 - (29%)
Similarity:158/327 - (48%) Gaps:54/327 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 IVWVFKAFVMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQV 215
            |::||    :.|:....:..|||||||:...:||...||..::|||:.|:::.:: |.......:
Zfish    51 IIYVF----LSLLSAWTVFLNLLVIISISHFKKLHTPTNMIILSLAVTDLLIGLI-MPVEAIRLI 110

  Fly   216 TGRWNFSPFLCDLW-NSLDVYFSTASILHLCCISVDRYYAIVKPLKYP--ISMTKRVVGIMLLNT 277
            ...|.|...||:|: ..:|:..|| |:.:|..|:||||.|:..||.||  |::||.::.|.|  :
Zfish   111 ETCWYFGDTLCELYLLFVDLLIST-SLSNLVLIAVDRYVAVCHPLLYPQKITITKTLMSICL--S 172

  Fly   278 WISPALLSFLPIFIGWYTTPQHQQFVIQNPTQCSFVVNKYYAVISSSISFWIPCTIMIFTYLAIF 342
            |:..:...........|....|:..|...  :|..:::..:.|....:||..|||::|..||.||
Zfish   173 WVCLSAYIIAIAINNRYFDTSHRTDVCYG--ECLAIISFSWTVTDLFMSFIFPCTVIIILYLRIF 235

  Fly   343 REANRQEKQLMMRHGNAMLMHRPSMQPSGEALSGSGSSKTLTLHEVEQEHTPTKDKHLIKMKREH 407
            ...::|.|.:            .|:...|:.:: .||                     :|.|.|.
Zfish   236 YVVHQQVKVI------------NSLMKGGKCVT-EGS---------------------VKRKSES 266

  Fly   408 KAARTLGIIMGTFILCWLPFFLWYTLSMTCEECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDF 472
            |||.|||||:..::|||:|:::       |....:....::.|.|:.|.:|.||||:||.|...|
Zfish   267 KAALTLGIIVTVYLLCWIPYYI-------CSLTVMTSTALNALLWVVYASSGLNPLVYALFYPWF 324

  Fly   473 RE 474
            ::
Zfish   325 KK 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tmA_DmOct-betaAR-like 155..476 CDD:320194 93/323 (29%)
TM helix 1 155..181 CDD:320194 9/25 (36%)
TM helix 2 188..214 CDD:320194 7/25 (28%)
TM helix 3 226..256 CDD:320194 13/30 (43%)
TM helix 4 268..291 CDD:320194 3/22 (14%)
TM helix 5 315..344 CDD:320194 11/28 (39%)
TM helix 6 404..434 CDD:320194 14/29 (48%)
TM helix 7 444..469 CDD:320194 10/24 (42%)
taar20uXP_001920823.4 7tmA_TAARs 50..327 CDD:320183 95/327 (29%)
TM helix 1 51..77 CDD:320183 11/29 (38%)
TM helix 2 84..109 CDD:320183 7/25 (28%)
TM helix 3 121..151 CDD:320183 13/30 (43%)
TM helix 4 163..186 CDD:320183 5/24 (21%)
TM helix 5 208..237 CDD:320183 11/28 (39%)
TM helix 6 263..293 CDD:320183 15/36 (42%)
TM helix 7 296..321 CDD:320183 10/24 (42%)

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