DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and chrm4a

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_001922442.1 Gene:chrm4a / 100150701 ZFINID:ZDB-GENE-090410-6 Length:513 Species:Danio rerio


Alignment Length:521 Identity:126/521 - (24%)
Similarity:201/521 - (38%) Gaps:158/521 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 LNATQPFGGSGL---NFNESGAGLSDHHHHQ------------QHNPDEDWLDNIVWVFKAFVML 161
            :|.|...|..||   |||.|.:.:|...:..            .....|.....:..||.|.|..
Zfish     1 MNVTNSTGAEGLAPWNFNGSLSNVSSDANFSCDSGSANGSCAAVEGDGESPYKTVEMVFIALVTG 65

  Fly   162 LIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNFSPFLC 226
            .:....:.||:||::|:...|.|:.:.|||:.|||.||:::.:.:|.......:.|.|...|.:|
Zfish    66 SLSFVTVVGNILVMLSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTVYIIKGYWPLGPVVC 130

  Fly   227 DLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIMLLNTWISPALLSFL---P 288
            |||.:||...|.||:::|..||.|||:.:.|||.||...|.::.|:|:.:.||    |||:   |
Zfish   131 DLWLALDYVVSNASVMNLLIISFDRYFCVTKPLSYPTRRTTKMAGLMIASAWI----LSFILWAP 191

  Fly   289 IFIGWYTTPQHQQFVI----QNPTQC--SFVVNKYYAVISSSISFWIPCTIMIFTYLAIF----- 342
            ..:.|       ||::    ..|.:|  .|:.|......::..:|::|..||...|:.|.     
Zfish   192 AILFW-------QFIVGARTVAPGECYIQFLSNPAVTFGTAIAAFYLPVVIMTVLYVHISLASRS 249

  Fly   343 ------REANRQEK----------QLMMRHGNAMLMHRPSMQP---------------------- 369
                  .||.:::|          .::.::.|.....:||:..                      
Zfish   250 RVSKQKPEAKKEKKAQKSSGLLKSHILKQNNNNQSPPKPSLDTCSTVDTMKNGKLEESVVSAKAD 314

  Fly   370 ---SGEALSGSGSSKTLTLHEVEQEH------------TP--------------------TKD-- 397
               ..|....|..|.|.::...|.:.            ||                    ||.  
Zfish   315 SCVQAEEKESSNDSSTASIAPKEPKERANSEVTSDAGLTPAPAAAPKLNPQSKWSKIKIVTKQAG 379

  Fly   398 -------------------------------------KHLIKMK-----REHKAARTLGIIMGTF 420
                                                 :..:|.|     ||.|..:|:..|:..|
Zfish   380 DECITAIEIVPPNSTGESRSIPVSRPRTVARKFASIARSQVKRKRQMAAREKKVTKTIFAILLAF 444

  Fly   421 ILCWLPFFLWYTLSMTCEECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFREAFRNTLLCLFC 485
            |:.|.|:.:...:|..|:.| |||.|.:|.:|:.|.|||:||..||..|..|::.|:|.|:|.:.
Zfish   445 IITWTPYNVMVLISTFCQSC-VPDTVWAIGYWLCYVNSTINPACYALCNATFKKTFKNLLMCQYK 508

  Fly   486 N 486
            |
Zfish   509 N 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 60/186 (32%)
7tm_1 170..465 CDD:278431 102/425 (24%)
chrm4aXP_001922442.1 7tm_4 70..>199 CDD:304433 50/139 (36%)
7tm_1 74..488 CDD:278431 102/425 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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