DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and adrb2b

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001082940.2 Gene:adrb2b / 100037315 ZFINID:ZDB-GENE-070410-32 Length:409 Species:Danio rerio


Alignment Length:418 Identity:138/418 - (33%)
Similarity:214/418 - (51%) Gaps:74/418 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 NALAATGSSSASNSSTGGIALPLGTATPATHELNATQPFGGSGLNFNESGAGLSDHHHHQQHNPD 144
            |.|....:|...|.|.|               |||:.|...|...::::..              
Zfish     5 NTLITENTSLYMNISAG---------------LNASSPVSLSVSEYSDAEV-------------- 40

  Fly   145 EDWLDNIVWVFKAFVMLLIIIAAICGNLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTF 209
                     |..:.::.::::..:.||.|||.:::|.::|:.:||||:.|||.||:::.:|.:.|
Zfish    41 ---------VLISILIGILVLVIVFGNALVISAIVRFQRLQTVTNYFISSLACADLVMGLMVVPF 96

  Fly   210 NFSVQVTGRWNFSPFLCDLWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVGIML 274
            .....:...|:|..|.|:.|.:.||...||||..||.|::|||.||:.||:|...:|||....|:
Zfish    97 GACYILLNTWHFGNFFCEFWTATDVLCVTASIETLCVIALDRYIAIMWPLRYQSMLTKRKACGMV 161

  Fly   275 LNTWISPALLSFLPIFIGWYTTPQHQQF-VIQNPTQCSFVVNKYYAVISSSISFWIPCTIMIFTY 338
            :..|...||:|||||.:.|:.:.:.:.. .::.||.|.|..|..|||.||.|||:||..||.|.|
Zfish   162 IGVWAVAALISFLPIHMEWWVSDEPEALSCLEEPTCCDFNTNAAYAVTSSIISFYIPLVIMAFVY 226

  Fly   339 LAIFREANRQEKQLMMRHGNAMLMHRPSMQPSGEALSGSGSSKTLTLHEVEQEHTPTKDKHLIKM 403
            ..:|:||.||.:::                   :.:.|...:::|:    .||....|::.....
Zfish   227 SRVFQEARRQLQKI-------------------DRIEGRIRTQSLS----TQEGNEIKNRRTKFC 268

  Fly   404 KREHKAARTLGIIMGTFILCWLPFFLWYTLSMTCEECQVPDIVV--SILFWIGYFNSTLNPLIYA 466
            .::|||.:|||||||||.|||||||:   |::.....::.:|::  .||.||||.||..|||||.
Zfish   269 MKDHKALKTLGIIMGTFTLCWLPFFV---LNVVAAIWKMDNIMLPFRILNWIGYANSAFNPLIYC 330

  Fly   467 YFNRDFREAFRNTLLCLFCNWWKDRHLP 494
            . :.:||.||:. :||     |:..|||
Zfish   331 R-SPEFRCAFQE-ILC-----WRPSHLP 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 72/178 (40%)
7tm_1 170..465 CDD:278431 114/297 (38%)
adrb2bNP_001082940.2 7tm_GPCRs 41..339 CDD:333717 119/324 (37%)
TM helix 1 43..67 CDD:320095 5/23 (22%)
TM helix 2 76..98 CDD:320095 10/21 (48%)
TM helix 3 114..136 CDD:320095 10/21 (48%)
TM helix 4 159..175 CDD:320095 6/15 (40%)
TM helix 5 204..227 CDD:320095 13/22 (59%)
TM helix 6 272..297 CDD:320095 20/27 (74%)
TM helix 7 308..333 CDD:320095 13/25 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H30948
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24248
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X822
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.010

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