DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta2R and taar20o

DIOPT Version :9

Sequence 1:NP_001163596.2 Gene:Octbeta2R / 41549 FlyBaseID:FBgn0038063 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_017213636.2 Gene:taar20o / 100002324 ZFINID:ZDB-GENE-060414-4 Length:350 Species:Danio rerio


Alignment Length:306 Identity:90/306 - (29%)
Similarity:146/306 - (47%) Gaps:48/306 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 NLLVIISVMRVRKLRVITNYFVVSLAMADIMVAIMAMTFNFSVQVTGRWNFSPFLCDLWNSLDVY 235
            |||||||:...:||...||..::|||:.|::|.:: |.......:...|.|....|.|:......
Zfish    67 NLLVIISISHFKKLHTPTNMIILSLAVTDLLVGLV-MPVEAIRLIETCWYFGDTFCGLYIFFVSL 130

  Fly   236 FSTASILHLCCISVDRYYAIVKPLKYP--ISMTKRVVGIMLLNTWISPALLSFLPIFIGWYTTPQ 298
            ..:||:.:|..|:||||.|:..||.||  |::||.::.|.|  :|..........:....|....
Zfish   131 LLSASLGNLVLIAVDRYVAVCHPLLYPQKITITKTLMSICL--SWAGLTAYIITLVINNSYFDTS 193

  Fly   299 HQQFVIQNPTQCSFVVNKYYAVISSSISFWIPCTIMIFTYLAIFREANRQEKQLMMRHGNAMLMH 363
            |:..|...  ||.::::..:.:....:||..||.::|..||.||...::|.|.:           
Zfish   194 HRTDVCYG--QCLYMISYSWILTELFMSFIFPCILIITLYLRIFYVVHQQVKVI----------- 245

  Fly   364 RPSMQPSGEALSGSGSSKTLTLHEVEQEHTPTKDKHLIKMKREHKAARTLGIIMGTFILCWLPFF 428
             .|:...|:.:: .||                     :|.|.|.|||.|||||:..::|||:|:|
Zfish   246 -NSLMKGGKCVT-EGS---------------------VKRKSESKAALTLGIIVSVYLLCWIPYF 287

  Fly   429 LWYTLSMTCEECQVPDIVVSILFWIGYFNSTLNPLIYAYFNRDFRE 474
            : |:|::...     ..:..:||.: :.||.||||:||.|...|::
Zfish   288 I-YSLTVNAS-----TTINGLLFAV-FANSGLNPLVYALFYPWFKK 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta2RNP_001163596.2 7tm_4 164..>342 CDD:304433 52/172 (30%)
7tm_1 170..465 CDD:278431 86/295 (29%)
taar20oXP_017213636.2 7tmA_TAARs 50..327 CDD:320183 90/306 (29%)
TM helix 1 51..77 CDD:320183 7/9 (78%)
TM helix 2 84..109 CDD:320183 8/25 (32%)
TM helix 3 121..151 CDD:320183 11/29 (38%)
TM helix 4 163..186 CDD:320183 5/24 (21%)
TM helix 5 208..237 CDD:320183 9/28 (32%)
TM helix 6 263..293 CDD:320183 17/30 (57%)
TM helix 7 296..321 CDD:320183 10/30 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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