DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5608 and vac14

DIOPT Version :10

Sequence 1:NP_650208.1 Gene:CG5608 / 41543 FlyBaseID:FBgn0038058 Length:687 Species:Drosophila melanogaster
Sequence 2:XP_009296175.2 Gene:vac14 / 447912 ZFINID:ZDB-GENE-040912-82 Length:782 Species:Danio rerio


Alignment Length:784 Identity:347/784 - (44%)
Similarity:492/784 - (62%) Gaps:118/784 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EPPYAPLSESCAKALGDKVYEKRKLASQEIEKMVTEFNNKNNSAQIRKLIEVLATDYATSRDANR 66
            |..::||:.:..:||.||:|||||:|:.||||:|.||..:|||||||.:|::|||::|.|:..:.
Zfish     4 EKDFSPLTPNIVRALNDKLYEKRKVAALEIEKLVREFVAQNNSAQIRHVIQILATEFALSQHPHS 68

  Fly    67 RKGALIGLAAMGLGLGKDSGKYVQGMVTPIMTCLSDPDIRVRYFACESLYNVVKVARSAIIPFFP 131
            |||.||||||..:.||||||.|::.::.|::||.:|.|.|:||:|||:|||:|||||.|::|.|.
Zfish    69 RKGGLIGLAACSIALGKDSGLYLKELIDPVLTCFNDSDSRLRYYACEALYNIVKVARGAVLPHFN 133

  Fly   132 ELFAALSRLVTDSDQMVKDGSELLDRLLKDIVTESSQTFNLQAFIPLLREHIYVKDAFARQYVIS 196
            .||..||:|..|.|..||.||||||||||||||||:: |:|.||:|||||.||..:.:|||::||
Zfish   134 VLFDGLSKLAADPDPNVKSGSELLDRLLKDIVTESNK-FDLVAFVPLLRERIYSNNQYARQFIIS 197

  Fly   197 WISILNAVPDINMVNYLTEILDGLFVMLEDNTLEIQRMCETTISQFLKSIRNDSSSVRMEDTINT 261
            ||.:|.:|||||:::||.|||||||.:|.|::.||:||||..:.:|||.|:.:.|||:..:..|.
Zfish   198 WIHVLESVPDINLLDYLPEILDGLFQILGDSSKEIRRMCELVLGEFLKEIKKNPSSVKFAEMANI 262

  Fly   262 LITHAQ------SPNELIKSIAITWIREFVQIFGPNVLPYASGIFTAILPCLEYNVESKRSIKEC 320
            |:.|.|      |.|:||:..::||:|||:|:.|..||||:|||.||:||||.|: :.|:|.||.
Zfish   263 LVIHCQVSDESKSTNDLIQLTSMTWMREFIQLAGRVVLPYSSGILTAVLPCLSYD-DRKKSTKEA 326

  Fly   321 AVSVNNSMMLLVS------TKELKTE--------------------------------------- 340
            |.:.|:|:|.||:      .:|.:|:                                       
Zfish   327 ASACNHSLMKLVTPEDDEDDEESQTKSSPPSDEAPSKKEGDLNDSLNESQESVGFSNISFFTPAS 391

  Fly   341 ---TVAKIDLRSIMDVLSQYLTHNS---MHTKIAVLKWIHHLFTNFPNEMSVHASNLNTNLLSTL 399
               :...:||..|:.||.::| |:|   |.|:||||||::||:...|.:|..|..:|...||.||
Zfish   392 SDRSAVTLDLDGIVQVLDRHL-HDSSTGMMTRIAVLKWLYHLYIKTPRKMFKHTDSLFPMLLKTL 455

  Fly   400 ADNSDEVVLQSLSVLAEIVNSQESR--------------------------------ELNDFN-- 430
            :|.||||:|:.|.|||||.:|...:                                ::.|.:  
Zfish   456 SDESDEVILKDLEVLAEIASSPAGQTDTSGSCDISDSKTKLHIPGGVRDGQPVVVGSKMTDLSPS 520

  Fly   431 ----KSHYRKFLLSLLNLFSEEKLILENRASLIIRKLCVLLNAEYIYRTFAEIIAEGVPNLKFAS 491
                .|::.||:::||..||.|:.:||.|.:.|||:||:||:||.|:.:.|:|:.: ..:|||||
Zfish   521 TPSMNSYFYKFMINLLKRFSLERKLLEMRGAFIIRQLCLLLHAENIFHSMADILLK-EEDLKFAS 584

  Fly   492 TVVRLLNMILLTSTELFELRTSLRNISNEKSADLFQCLYKSWAHCPVSTLSLCLLTQSYQHVSRL 556
            |:|:.||.|||||.|||:||..|:::..::|..||.|||:||.|.||:|:|||.|||:|:|...|
Zfish   585 TMVQTLNTILLTSAELFQLRNQLKDLRTQESCALFCCLYRSWCHNPVATVSLCFLTQNYRHAYDL 649

  Fly   557 VTLFADVEITLELLTEFDKLVQLIESPIFAPLRLTLVSKANNCADAQYLAHALFGILMLLPQTEA 621
            :..|.|:|:|::.|.|.||||||||||||..|||.|:...:|    .||..||:|:||||||::|
Zfish   650 IQKFGDLEVTVDFLMEVDKLVQLIESPIFTYLRLQLLDVEHN----PYLIKALYGLLMLLPQSQA 710

  Fly   622 FDTLRNRLQCVPNYWGHEP------VDERNSLEYK----SGIDFDALEQHFIKLQKAHREQRIVH 676
            |..|.:||.||||     |      .|::.:::.|    ..||:..|.|||.::|..|.|.|...
Zfish   711 FQLLSHRLSCVPN-----PELMRTLEDQKVAVKDKHLAQPHIDYSELLQHFDRVQSKHLEVRHQR 770

  Fly   677 RKRS 680
            ..||
Zfish   771 TGRS 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5608NP_650208.1 HEAT repeat 45..79 CDD:293787 19/33 (58%)
Vac14_Fab1_bd 65..161 CDD:403838 56/95 (59%)
HEAT repeat 91..121 CDD:293787 15/29 (52%)
Adaptin_N <92..>427 CDD:396262 175/423 (41%)
HEAT repeat 132..161 CDD:293787 18/28 (64%)
HEAT repeat 172..201 CDD:293787 17/28 (61%)
Vac14_Fig4_bd 452..632 CDD:463395 95/179 (53%)
vac14XP_009296175.2 None

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