DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5608 and vacl-14

DIOPT Version :10

Sequence 1:NP_650208.1 Gene:CG5608 / 41543 FlyBaseID:FBgn0038058 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_492215.1 Gene:vacl-14 / 172589 WormBaseID:WBGene00010565 Length:694 Species:Caenorhabditis elegans


Alignment Length:705 Identity:256/705 - (36%)
Similarity:412/705 - (58%) Gaps:53/705 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YAPLSESCAKALGDKVYEKRKLASQEIEKMVTEFNNKNNSAQIRKLIEVLATDYATSRDANRRKG 69
            |.|:|....:::.||.||:||.|:.::||:|.:..|.|..:|:.|.:.||. :...|.::|:|||
 Worm     6 YGPISAGIIRSITDKSYERRKAAALDVEKLVRDLFNNNQLSQLDKCLSVLG-ELINSGNSNQRKG 69

  Fly    70 ALIGLAAMGLGLG-KDSGKYVQGMVTPIMTCLSDPDIRVRYFACESLYNVVKVARSAIIPFFPEL 133
            .|||:||..:.|| |::..|...:|.||:.|..|.|:::||:|||||||:.|:.:::::..|.::
 Worm    70 GLIGMAAASIALGNKNAPPYTAKLVEPIIPCFHDADLQIRYYACESLYNIAKICKTSVLAHFEDI 134

  Fly   134 FAALSRLVTDSDQMVKDGSELLDRLLKDIVTESSQTFNLQAFIPLLREHIYVKDAFARQYVISWI 198
            |..|.|:..||||.|:.|:|||:||:.:||. |.|.|::...:.|:|:.||.:.:..|::::.|:
 Worm   135 FDVLWRVTADSDQNVRGGAELLNRLITEIVL-SEQEFDIAILMSLIRDRIYTQTSSNRRFILEWL 198

  Fly   199 SILNAVPDINMVNYLTEILDGLFVMLEDNTLEIQRMCETTISQFLKSIRNDSSSVRMED---TIN 260
            :.:::.|..:..||::||.||||.||.:....::.:|||.:..||.:||:...|:.:||   .||
 Worm   199 NTIDSAPFFSFCNYISEISDGLFKMLGEQAPAVRDLCETVLGNFLTAIRSKPESLSLEDRIQMIN 263

  Fly   261 TLITHAQSPNE--LIKSIAITWIREFVQIFGPNVLPYASGIFTAILPCLEYNVESKRSIKECAVS 323
            .|:.|... ||  |.:.:::.|:.|||:::..::|...|.....|||.:   ||::..    |.:
 Worm   264 VLVVHTHE-NEPFLARKLSLIWLEEFVKLYKTDLLVMLSTCLVGILPSI---VETELK----ADA 320

  Fly   324 VNNSMMLLVSTKELKTETVAKIDLRSIMDVLSQYLTHNSMHTKIAVLKWIHHLFTNFPNEMSVHA 388
            ||..:|.||...:|:.:.:.|     .::||.:|:.::.:.|::.||.||.||.::.|.::.||.
 Worm   321 VNRLLMALVGEAKLEQDILDK-----TIEVLLKYIKYDVVETRVTVLNWIRHLHSSMPGQLFVHM 380

  Fly   389 SNLNTNLLSTLADNSDEVVLQSLSVLAEIVNSQESRELNDFNK-----------SHYR----KFL 438
            ..:...||:||:|.||||:|..|.:::.|..|:.:.:..|.:.           ||..    ||:
 Worm   381 HQIFPVLLNTLSDTSDEVLLLDLFLISNICQSESAPDQVDVSTFGLNETELKQVSHISPFLIKFV 445

  Fly   439 LSLLNLFSEEKLILENRASLIIRKLCVLLNAEYIYRTFAEIIAEGVPNLKFASTVVRLLNMILLT 503
            ||||.:|..|..:|..|..||||:||:||...:|||... ::.|......||..:|..|:.:|||
 Worm   446 LSLLEMFRTEPTLLRERGVLIIRQLCLLLEPAHIYRVIC-VLLERESKHNFAQEMVSTLHGVLLT 509

  Fly   504 STELFELRTSLRNISNEKSADLFQCLYKSWAHCPVSTLSLCLLTQSYQHVSRLVTLFADVEITLE 568
            :||||.||..||.:|||.|..||:|:::.|::.|::.|.||||:|.||..:.:..|.:.|:||::
 Worm   510 ATELFILRDELRALSNESSRSLFECIFRVWSNRPIALLGLCLLSQHYQQAADIALLLSQVDITVD 574

  Fly   569 LLTEFDKLVQLIESPIFAPLRLTLVSKANNCADAQYLAHALFGILMLLPQTEAFDTLRNRLQCVP 633
            :|.|.||||.|:|||:.|.:|:.|:|..:.    ..|...|..:||||||:|||.||..|||.||
 Worm   575 VLLEIDKLVNLVESPVLAYVRMDLLSSIHR----PPLCTVLSALLMLLPQSEAFVTLHKRLQAVP 635

  Fly   634 NYWGHEPVDERNSLEY-----KSGIDFDALEQHFIKLQKAHREQRIVHRKRSVIT 683
            ..     |...|| .|     ...|||..|..|| |...|.|:..:..|.|.:::
 Worm   636 AL-----VSIDNS-PYAPKVPPCRIDFPPLMLHF-KAALARRQTEVRSRHRDLLS 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5608NP_650208.1 HEAT repeat 45..79 CDD:293787 14/33 (42%)
Vac14_Fab1_bd 65..161 CDD:403838 44/96 (46%)
HEAT repeat 91..121 CDD:293787 15/29 (52%)
Adaptin_N <92..>427 CDD:396262 115/339 (34%)
HEAT repeat 132..161 CDD:293787 14/28 (50%)
HEAT repeat 172..201 CDD:293787 6/28 (21%)
Vac14_Fig4_bd 452..632 CDD:463395 80/179 (45%)
vacl-14NP_492215.1 Vac14_Fab1_bd 65..162 CDD:403838 44/96 (46%)
HEAT repeat 93..121 CDD:293787 15/27 (56%)
HEAT repeat 133..162 CDD:293787 14/28 (50%)
HEAT repeat 174..200 CDD:293787 6/25 (24%)
HEAT repeat 213..242 CDD:293787 11/28 (39%)
Vac14_Fig4_bd 456..634 CDD:463395 80/182 (44%)

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