DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5608 and vac14

DIOPT Version :9

Sequence 1:NP_650208.1 Gene:CG5608 / 41543 FlyBaseID:FBgn0038058 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001135664.1 Gene:vac14 / 100216224 XenbaseID:XB-GENE-975921 Length:782 Species:Xenopus tropicalis


Alignment Length:776 Identity:342/776 - (44%)
Similarity:489/776 - (63%) Gaps:109/776 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EPPYAPLSESCAKALGDKVYEKRKLASQEIEKMVTEFNNKNNSAQIRKLIEVLATDYATSRDANR 66
            |...:||:.:..:||.||:|||||:|:.||||:|.||.::||:|||:.:|::|:.::|.|:..:.
 Frog     4 ERDLSPLTPNIVRALNDKMYEKRKVAALEIEKLVREFVSQNNTAQIKHVIQILSQEFALSQHPHS 68

  Fly    67 RKGALIGLAAMGLGLGKDSGKYVQGMVTPIMTCLSDPDIRVRYFACESLYNVVKVARSAIIPFFP 131
            |||.||||||..:.||||||:|::.::.|::||.:|.|.|:||:|||:|||:|||||.:::|.|.
 Frog    69 RKGGLIGLAACSIALGKDSGQYLRELIEPVLTCFNDADSRLRYYACEALYNIVKVARGSVLPHFN 133

  Fly   132 ELFAALSRLVTDSDQMVKDGSELLDRLLKDIVTESSQTFNLQAFIPLLREHIYVKDAFARQYVIS 196
            .||..||:|..|.|..||.||||||||||||||||:: |:|..|:|||||.||..:.:|||::||
 Frog   134 VLFDGLSKLAADPDPNVKSGSELLDRLLKDIVTESNK-FDLVGFVPLLRERIYSNNQYARQFIIS 197

  Fly   197 WISILNAVPDINMVNYLTEILDGLFVMLEDNTLEIQRMCETTISQFLKSIRNDSSSVRMEDTINT 261
            ||.:|.:|||||:::||.|||||||.:|.||:.||::|||.::.:|||.|:....||:..:..|.
 Frog   198 WILVLESVPDINLLDYLPEILDGLFQILGDNSKEIRKMCEVSLGEFLKEIKKLPDSVKFAEMANI 262

  Fly   262 LITHAQSPNELIKSIAITWIREFVQIFGPNVLPYASGIFTAILPCLEYNVESKRSIKECAVSVNN 326
            |:.|.||.::||:..|:||:|||:|:.|..:|||:|||.||:||||.|: :.|::|||.|...|.
 Frog   263 LVIHCQSTDDLIQLTAMTWMREFLQLAGRVMLPYSSGILTAVLPCLSYD-DRKKNIKEVANVCNQ 326

  Fly   327 SMMLLVSTKELKTETV------------------------------------------------- 342
            |:|.|::.::.:|:.|                                                 
 Frog   327 SLMKLITPEDDETDDVRQSPATQPDEDLSSNHENSSQQTSNNRVLPSAPDSNLDNANIFAPSSMH 391

  Fly   343 ---AKIDLRSIMDVLSQYLTHNS---MHTKIAVLKWIHHLFTNFPNEMSVHASNLNTNLLSTLAD 401
               ..::|..|:.||.::| |.|   |.|:|.||||::||:...|.:|..|..:|...||.||:|
 Frog   392 TGPVSLNLDGIVHVLDRHL-HESTTGMMTRICVLKWLYHLYIKTPRKMFRHTDSLFPILLKTLSD 455

  Fly   402 NSDEVVLQSLSVLAEIVNSQ--ESRELNDF---------------NK------------------ 431
            .||||:|:.|.|||||.:|.  ::.::.|.               ||                  
 Frog   456 ESDEVILKDLEVLAEIASSPAGQTDKMTDCTDLPTGVSELHVPVPNKVAQAHNSVIRGLECSPST 520

  Fly   432 ----SHYRKFLLSLLNLFSEEKLILENRASLIIRKLCVLLNAEYIYRTFAEIIAEGVPNLKFAST 492
                |::.:|:::||..||.|:.:||.|.:.|||:||:|||||.|:.:.|:|:.. ..:||||||
 Frog   521 PTMNSYFHRFMINLLKRFSSERKLLETRGAFIIRQLCLLLNAENIFHSMADILLR-EEDLKFAST 584

  Fly   493 VVRLLNMILLTSTELFELRTSLRNISNEKSADLFQCLYKSWAHCPVSTLSLCLLTQSYQHVSRLV 557
            :|:.||.|||||:|||:||:.|:::...:|.:||.|||:||.|.||:|:|||.|||:|||...|:
 Frog   585 MVQNLNSILLTSSELFQLRSQLKDLQTPESCNLFCCLYRSWCHNPVATVSLCFLTQNYQHAYHLI 649

  Fly   558 TLFADVEITLELLTEFDKLVQLIESPIFAPLRLTLVSKANNCADAQYLAHALFGILMLLPQTEAF 622
            ..|.|:|:|::.|||.||||||||.|||..|||.|:...|:    .||..||:|:||||||:.||
 Frog   650 QKFGDLEVTVDFLTEVDKLVQLIECPIFTYLRLQLLDVENH----PYLIRALYGLLMLLPQSSAF 710

  Fly   623 DTLRNRLQCVPN-----YWGHEPVDERNSLEYKSGIDFDALEQHFIKLQKAHREQRIVHRK 678
            ..|.:|||||||     ....:|...|.|.|..:.||...|.|||.|:||.|.|.|  |::
 Frog   711 QLLSHRLQCVPNPQLMRPGNKQPESSRASKEAPARIDDAELLQHFEKVQKKHLEIR--HQR 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5608NP_650208.1 HEAT repeat 45..79 CDD:293787 16/33 (48%)
Vac14_Fab1_bd 65..161 CDD:289521 55/95 (58%)
HEAT repeat 91..121 CDD:293787 15/29 (52%)
HEAT repeat 132..161 CDD:293787 18/28 (64%)
HEAT repeat 172..201 CDD:293787 16/28 (57%)
Vac14_Fig4_bd 452..629 CDD:288745 95/176 (54%)
vac14NP_001135664.1 HEAT repeat 12..35 CDD:293787 12/22 (55%)
Vac14_Fab1_bd 67..163 CDD:372292 55/95 (58%)
HEAT repeat 94..122 CDD:293787 14/27 (52%)
HEAT repeat 134..163 CDD:293787 18/28 (64%)
HEAT repeat 175..204 CDD:293787 16/28 (57%)
HEAT repeat 214..243 CDD:293787 16/28 (57%)
Vac14_Fig4_bd 542..717 CDD:371795 95/179 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 221 1.000 Domainoid score I2563
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6528
Inparanoid 1 1.050 604 1.000 Inparanoid score I924
OMA 1 1.010 - - QHG54109
OrthoDB 1 1.010 - - D227979at33208
OrthoFinder 1 1.000 - - FOG0004012
OrthoInspector 1 1.000 - - oto102935
Panther 1 1.100 - - LDO PTHR16023
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1626
SonicParanoid 1 1.000 - - X3296
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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