DRSC/TRiP Functional Genomics Resources

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Protein Alignment trus and Pdcd2l

DIOPT Version :9

Sequence 1:NP_650205.1 Gene:trus / 41540 FlyBaseID:FBgn0038055 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_080825.1 Gene:Pdcd2l / 68079 MGIID:1915329 Length:364 Species:Mus musculus


Alignment Length:490 Identity:133/490 - (27%)
Similarity:188/490 - (38%) Gaps:140/490 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKNKSTVYLGYEDEEVTAKQEQLLNSCTNKIGGTPD-WPRHEVTIPSCPLCGAVRPLIVQMYAP 64
            ||..:..|.||..|..|....:......::|:||.|| .|......|.|..|.....|:||:|.|
Mouse     1 MAAVRKPVLLGLRDTAVKGCPKGPSAWTSSKLGGVPDALPAVTTPGPQCGRCAQPLTLVVQVYCP 65

  Fly    65 LDRSQFHRSLYVFGCMNPVC-SQNSKSWCCVRTQHLDHQYEVISEHSPKATPTKKQNSKKKGKSS 128
            ||.|.|||.||||.|..|.| :..::||...|:|.|.             .| :|:....:.:|.
Mouse    66 LDGSPFHRLLYVFACARPGCGNSQTRSWKVFRSQCLQ-------------VP-EKETWNAQNQSD 116

  Fly   129 GLQAISWCSGADDWGDSSGGATEQAKTISVALDEAMDITADDDQNERNGNVRPNALQYAKSDIQI 193
            .|.|.:||.|:.|||..    ||:...     ..|.|:.:|      :.:||           .:
Mouse   117 SLAAENWCEGSQDWGSD----TEETPP-----PPASDLGSD------SNDVR-----------AL 155

  Fly   194 DEPAKLEQVKIAADDDDDEDESTSLENELISGFHQMDMISPQNADDDPNANCAAAAAPSLDGAGA 258
            |...||:.:::         :.|:|                            |...||..|.|.
Mouse   156 DWTEKLQALRL---------QDTAL----------------------------AVTCPSPSGEGL 183

  Fly   259 SAASAAIGAEIEGPETDLVLVDTPKKPERDLIALLKHTSGALSQIKDLTLKSYYIAVDVENKTQA 323
            :..:|.                    |:                     .:.|||.|       |
Mouse   184 TVPTAV--------------------PQ---------------------FQPYYICV-------A 200

  Fly   324 EEYENFGGALSMDHIRDLYQEYKLRD-QNPGQSPTGGASGPGEQGDENESYEKALPAHGDLVFHN 387
            || |::|..:.:||...|.|||:.|: .:..|..:.|:|      |.:|.|||...:.||..|:.
Mouse   201 EE-EDYGSVVDLDHAHSLLQEYQRREGVDMEQLLSLGSS------DGDEKYEKTTVSSGDPTFYR 258

  Fly   388 FITTIHQNPGQLLRYSRDTIPL-LVAPFTE--PLPKCQNCRGETICEVQLLPTLIPKLRFQVNGC 449
            |:..|.....|:||||....|| |..|..|  .:|.|..|.|:...|.||:|.|:..|.....| 
Mouse   259 FMKRIAACQEQILRYSWSGEPLFLSCPTFEVSEVPACSGCGGQRTFEFQLMPALVSMLSSANLG- 322

  Fly   450 NAPIEFGNVLVFTCLKSCWDTPDLMRYEHIVVQSE 484
             ..:|||.:||:||.:|||.....|..|...|..|
Mouse   323 -LAVEFGTILVYTCKQSCWPPNQQMPMEEFCVLQE 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trusNP_650205.1 PDCD2_C 371..482 CDD:282100 42/113 (37%)
Pdcd2lNP_080825.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 125..150 9/39 (23%)
PDCD2_C 242..356 CDD:282100 43/115 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835911
Domainoid 1 1.000 85 1.000 Domainoid score I8209
eggNOG 1 0.900 - - E1_KOG2061
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41861
Inparanoid 1 1.050 165 1.000 Inparanoid score I4186
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54449
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001596
OrthoInspector 1 1.000 - - oto93940
orthoMCL 1 0.900 - - OOG6_103161
Panther 1 1.100 - - LDO PTHR46421
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1686
SonicParanoid 1 1.000 - - X4734
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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