DRSC/TRiP Functional Genomics Resources

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Protein Alignment trus and pdcd2

DIOPT Version :9

Sequence 1:NP_650205.1 Gene:trus / 41540 FlyBaseID:FBgn0038055 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001038603.1 Gene:pdcd2 / 393370 ZFINID:ZDB-GENE-040426-1236 Length:358 Species:Danio rerio


Alignment Length:481 Identity:102/481 - (21%)
Similarity:172/481 - (35%) Gaps:176/481 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 STVYLGYEDEEVTAKQEQLL-NSCTNKIGGTPDWPRHEVTIPS-----CPLCGAVRPLIVQMYAP 64
            |.|.||:.:|   |:..||| :...:|:||.|.| ..:..:|:     |..|......::|:|||
Zfish    13 SDVVLGFLEE---AESWQLLSDQFPSKVGGRPAW-LSQSDLPAVSELQCEECKLPAVFLLQVYAP 73

  Fly    65 L---DRSQFHRSLYVFGCMNPVCSQNSKSWC--CVRTQHLDHQYEVISEHSPKATPTKKQNSKKK 124
            :   ||. |||:|:||.|..|.|...:.|.|  ..|:| |..:.|....:.|.....::.....:
Zfish    74 VTEYDRC-FHRTLFVFCCKTPACYTRNDSKCFKVFRSQ-LPRKNEFYPFNPPPDEKPEQPVHDAQ 136

  Fly   125 GKSSGLQAISWCSGADDWGDSSGGATEQAKTISVALDEAMDITADDDQNERNGNVRPNALQYAKS 189
            ...|||:....|           |...| |..|                      |.:::.|...
Zfish   137 VLGSGLKLCRLC-----------GCLGQ-KACS----------------------RCHSVTYCCK 167

  Fly   190 DIQIDEPAKLEQVKIAADDDDDEDESTSLENELISG-FHQMDMISPQNADDDPN---ANCAAAAA 250
            :.|..:..:..:.:..|       |::.:..||.|. |.:.::::      :|.   |......:
Zfish   168 EHQTTDWKQRHKKECLA-------EASQVSGELNSFLFPEWELVT------EPEVIPAKDELQES 219

  Fly   251 PSLDGAGASAASAAIGAEIEGPETDLVLVDTPKKPERDLIALLKHTSGALSQIKDLTLKSYYIAV 315
            ||||                                ::.||.|.      |.::|..|:|..:..
Zfish   220 PSLD--------------------------------QENIASLN------SGLEDSELESMALHE 246

  Fly   316 DVENKTQAEEYENFGGALSMDHIRDLYQEYKLRDQNPGQSPTGGASGPGEQGDENESYEKALPAH 380
            .:::|                    ::|::|.|                                
Zfish   247 TLDSK--------------------VFQKFKQR-------------------------------- 259

  Fly   381 GDLVFHNFITTIHQNPGQLLRYSRDTIPLLV----APFTEPLPKCQNCRGETICEVQLLPTLIPK 441
                       |...|.|:|||.|...||.|    .|..|.:|:| .|..:.:.|.|::|.|:..
Zfish   260 -----------IANEPQQVLRYCRGGSPLWVTAEHVPREEEVPEC-TCGAKRLFEFQIMPQLLNH 312

  Fly   442 LRFQVNGCNAPIEFGNVLVFTCLKSC 467
            |:  |:..:|.|::|.|.::||.:||
Zfish   313 LK--VDSTDASIDWGTVAIYTCAESC 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trusNP_650205.1 PDCD2_C 371..482 CDD:282100 29/101 (29%)
pdcd2NP_001038603.1 zf-MYND 145..182 CDD:280009 8/70 (11%)
PDCD2_C 238..351 CDD:282100 35/165 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54449
OrthoDB 1 1.010 - - D1181470at2759
OrthoFinder 1 1.000 - - FOG0001596
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1686
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.860

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